| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1838 |
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| Symbol | |
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| ID | 4809384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 2181190 |
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| End bp | 2183049 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640107252 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001038252 |
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| Protein GI | 125974342 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3693] Beta-1,4-xylanase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.561717 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAAGA AAAAACTGTT GACCCTTTTG ACAGTCTTTG CTCTGCTGAC TGTCGGTATC
TGCGGAAGTT TTTTGCCGTT ACCCAAAGCA TCCGCAGCAG CTCTGATTTA CGATGATTTT
GAAACAGGTC TGAACGGATG GGGACCAAGA GGACCGGAAA CCGTCGAACT TACCACCGAG
GAAGCTTACT CGGGAAGATA CAGTTTGAAG GTCAGCGGAC GTACCAGCAC ATGGAACGGG
CCCATGGTTG ACAAAACCGA TGTGTTGACT TTGGGCGAAA GCTATAAGTT GGGCGTATAT
GTAAAATTCG TGGGTGATTC CTATTCAAAT GAGCAAAGAT TCAGTTTGCA GCTTCAATAT
AACGACGGAG CAGGAGATGT ATACCAAAAT ATAAAAACCG CCACGGTTTA CAAGGGAACA
TGGACTTTGC TGGAAGGACA GCTTACAGTT CCCAGCCATG CAAAGGACGT AAAAATATAT
GTGGAAACCG AATTTAAAAA TTCTCCGAGT CCGCAGGACT TGATGGATTT CTATATTGAC
GATTTCACAG CAACACCTGC AAATTTGCCT GAAATTGAGA AAGATATTCC AAGCTTGAAA
GATGTCTTTG CCGGTTATTT CAAAGTGGGT GGTGCCGCAA CTGTGGCGGA ACTGGCGCCG
AAGCCTGCAA AAGAGCTTTT CCTCAAGCAT TATAACAGCT TGACTTTTGG TAATGAGTTA
AAACCGGAAA GTGTACTTGA CTATGATGCT ACAATTGCTT ATATGGAGGC AAACGGAGGC
GACCAGGTTA ATCCGCAGAT AACCTTGAGA GCGGCAAGAC CCCTGTTGGA GTTTGCGAAA
GAACACAACA TACCTGTAAG AGGACATACC CTTGTATGGC ACAGCCAGAC ACCGGACTGG
TTCTTCAGAG AAAATTACTC TCAGGACGAA AATGCTCCCT GGGCATCCAA GGAAGTAATG
CTGCAAAGGT TGGAAAACTA CATAAAGAAT TTAATGGAAG CTTTGGCGAC CGAATATCCG
ACGGTTAAGT TCTATGCATG GGACGTTGTG AATGAGGCTG TTGATCCTAA TACTTCAGAC
GGTATGAGAA CTCCGGGTTC GAATAACAAA AATCCCGGAA GCTCCCTGTG GATGCAAACC
GTTGGAAGAG ATTTTATTGT TAAAGCTTTT GAATATGCAA GAAAATATGC TCCTGCGGAT
TGTAAACTCT TCTACAATGA CTATAATGAA TATGAAGACA GAAAATGTGA TTTTATTATT
GAAATTCTTA CCGAACTTAA AGCCAAAGGC CTGGTTGACG GTATGGGTAT GCAATCCCAC
TGGGTTATGG ATTATCCAAG CATAAGCATG TTTGAAAAAT CCATCAGAAG ATATGCAGCA
TTGGGATTGG AAATTCAGCT TACCGAGCTG GATATAAGAA ATCCTGACAA CAGCCAGTGG
GCTTTGGAAC GTCAGGCTAA TCGTTATAAG GAGCTTGTAA CAAAATTGGT CGATTTGAAA
AAAGAAGGCA TAAACATTAC GGCATTGGTA TTCTGGGGAA TAACCGACGC GACAAGCTGG
CTTGGAGGAT ATCCGCTCCT GTTTGACGCG GAATACAAGG CAAAACCTGC ATTTTATGCT
ATAGTTAACA GCGTTCCGCC GCTTCCGACA GAACCGCCGG TTCAGGTTAT ACCCGGTGAT
GTAAACGGTG ACGGTCGTGT AAATTCATCC GACTTGACTC TTATGAAAAG ATACCTTTTA
AAATCCATAA GCGACTTCCC GACACCGGAA GGAAAAATTG CGGCGGATTT AAACGAAGAC
GGCAAGGTAA ACTCGACAGA TTTGTTAGCG CTGAAAAAAC TCGTTCTGAG AGAACTTTGA
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| Protein sequence | MLKKKLLTLL TVFALLTVGI CGSFLPLPKA SAAALIYDDF ETGLNGWGPR GPETVELTTE
EAYSGRYSLK VSGRTSTWNG PMVDKTDVLT LGESYKLGVY VKFVGDSYSN EQRFSLQLQY
NDGAGDVYQN IKTATVYKGT WTLLEGQLTV PSHAKDVKIY VETEFKNSPS PQDLMDFYID
DFTATPANLP EIEKDIPSLK DVFAGYFKVG GAATVAELAP KPAKELFLKH YNSLTFGNEL
KPESVLDYDA TIAYMEANGG DQVNPQITLR AARPLLEFAK EHNIPVRGHT LVWHSQTPDW
FFRENYSQDE NAPWASKEVM LQRLENYIKN LMEALATEYP TVKFYAWDVV NEAVDPNTSD
GMRTPGSNNK NPGSSLWMQT VGRDFIVKAF EYARKYAPAD CKLFYNDYNE YEDRKCDFII
EILTELKAKG LVDGMGMQSH WVMDYPSISM FEKSIRRYAA LGLEIQLTEL DIRNPDNSQW
ALERQANRYK ELVTKLVDLK KEGINITALV FWGITDATSW LGGYPLLFDA EYKAKPAFYA
IVNSVPPLPT EPPVQVIPGD VNGDGRVNSS DLTLMKRYLL KSISDFPTPE GKIAADLNED
GKVNSTDLLA LKKLVLREL
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