Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_1827 |
Symbol | |
ID | 4809811 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 2164514 |
End bp | 2165485 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640107241 |
Product | copper amine oxidase-like protein |
Protein accession | YP_001038241 |
Protein GI | 125974331 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.19527 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGAA TCGCAAAAAT ATTAACAATA GTATTAATAG TTACATGCTT GTTATCATTA CCAACATCAG CAGTTGAGCT TCCAATTCGA GTAGTGGTGA ATGGAACAAA GATAAATTTT CCAGATGCAG AGCCGTTTAT TGATGAGAAT TCAAGAACAC AGGTGCCTAT CAGATTTGTT GGAGAAGCTC TGGGGGCGAA TGTAAGTTGG GACGGAAATA CAAAAAAAGT GACAATAACA TTAAACGGAA AAAAAGTAGT GCTTCAGATA GGGAATAAAA ACTATGAAGT AAACGGACAA CAGAAGCAAA TGGATACAGT GGCATTATTA AAAGAATCCA GAACTTTTGT TCCAGTAAGG TTTGTGAGTG AAGCATTGGG AGCAACCGTA AAGTGGAATG CAAATATAAG AACGGTGTAT ATTGATATGA ATGGTGATGT AACACCTTCT CCTGAACCGG CAGGAGGAAC AGTAAAATAT TATGACGGAA TAGCATTTAA TGATGTTACC GATGTTGACC AGTATGGAAG AATAAAGGTT GAAAAATTGA AGGAATTTTT GCTCAAGTTA GCAGATCAGC TGAGATTTGT AAAGGAAAAC GGAAAATATT ATATTGAATG CACATATCCA GAGAAACCTG AAGGTTATGA GTGGGGATTA GGTATAAGAG TTTCTAATAA GGACGGTACT TATATCACAT ATTCTCAAGT AGGGCGTAAT CCAAAATGGC TAATACCATC AGAAGGGGCA TTTAAAAAGG AAGCTTCAGA TATTACTGAT ATAAATAAAG TAAAATTGAT CAATATTGTA ATTTCACTAG ATCATCCAAA AAACGATAGC TTGGGAATAT TGAATATAGT TTATTATATG GACAAATCAG AGATGAGAGC TAAATTTGTA CCAGAATCAG GAACTATACC TTCGGAGAAT TATTCAGAAA CATTTGATTT TAATAAAATG TTCCAATGGT AG
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Protein sequence | MKRIAKILTI VLIVTCLLSL PTSAVELPIR VVVNGTKINF PDAEPFIDEN SRTQVPIRFV GEALGANVSW DGNTKKVTIT LNGKKVVLQI GNKNYEVNGQ QKQMDTVALL KESRTFVPVR FVSEALGATV KWNANIRTVY IDMNGDVTPS PEPAGGTVKY YDGIAFNDVT DVDQYGRIKV EKLKEFLLKL ADQLRFVKEN GKYYIECTYP EKPEGYEWGL GIRVSNKDGT YITYSQVGRN PKWLIPSEGA FKKEASDITD INKVKLINIV ISLDHPKNDS LGILNIVYYM DKSEMRAKFV PESGTIPSEN YSETFDFNKM FQW
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