Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_1822 |
Symbol | |
ID | 4809806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 2156010 |
End bp | 2156918 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640107236 |
Product | inner-membrane translocator |
Protein accession | YP_001038236 |
Protein GI | 125974326 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | [TIGR03409] urea ABC transporter, permease protein UrtB |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.564217 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAGTT ATTTACTGCA GATTTTTAAC GGGATAAGCG TAAGCTCGGT GCTTTTACTG GCAGCCCTGG GATTGGCAAT AACCTTCGGG CTTATGAGAA TTATCAACAT GGCCCATGGT GAGATGATAA TGATAGGTGC CTATACCACG TATATGGTGC AAAACTTATT TATATCATTT TTGGGAGAAA GATATTTCGA TCTGTATTTT ATTGCGGCAA TACCTCTTTC GTTCCTGATT ACAGGATTTG TCGGTTATTT GCTGGAGATT TCAATTGTAA AACGCCTGTA CGGCAGGACT TTGGACAGTT TATTGGCCAC ATGGGGAATA AGCCTTATAC TTCAGCAGTT AGCCAGAAAC ATTTTCGGTG CACCCAATGT AGATGTGAGA AGTCCAAGAT GGCTGAACGG TGGGGTGGTT GTTTTTGGAA ATATTCAGCT CCCCTACAAA AGGCTTTTTA TAATCCTGCT GGCTGCCCTT TGCATAGCCG GAGTATATTT ATTCCTCTTT AAAAGCGACA GCGGAAGAAG GATAAGAGCG GTTATGCAGA ATAGAAGTAT GGCCGAAAGC CTTGGTATAA ACACAAGAAA GGTGGATTCC ATGACCTTTG CAATTGGGTC GGGATTGGCA GGCATTGCCG GATGTGCCTT GACCCTGTTA GGCTCAATCG GACCAACCTT AGGAACCAAC TACATTGTGG ATACCTTTAT GGTTGTGGTA TTGGGCGGTG TCGGAAGAAT TATCGGCACA GTGGCCGGAG CAGCAGCGAT CGGAATCGGA AATACGACTT TCGAATATTT TACCAACGCC TCTTTGGGAA AGGTACTTGT ATTTCTTGCG GTTATTCTCT TTCTTCAATG GAAGCCTCAG GGGTTCTTTA GCGTAAGCAG CAGAGTATTG GATGAGTAA
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Protein sequence | MDSYLLQIFN GISVSSVLLL AALGLAITFG LMRIINMAHG EMIMIGAYTT YMVQNLFISF LGERYFDLYF IAAIPLSFLI TGFVGYLLEI SIVKRLYGRT LDSLLATWGI SLILQQLARN IFGAPNVDVR SPRWLNGGVV VFGNIQLPYK RLFIILLAAL CIAGVYLFLF KSDSGRRIRA VMQNRSMAES LGINTRKVDS MTFAIGSGLA GIAGCALTLL GSIGPTLGTN YIVDTFMVVV LGGVGRIIGT VAGAAAIGIG NTTFEYFTNA SLGKVLVFLA VILFLQWKPQ GFFSVSSRVL DE
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