| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1804 |
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| Symbol | |
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| ID | 4809788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 2130944 |
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| End bp | 2131666 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640107218 |
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| Product | cell wall hydrolase/autolysin |
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| Protein accession | YP_001038218 |
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| Protein GI | 125974308 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
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| TIGRFAM ID | [TIGR02883] N-acetylmuramoyl-L-alanine amidase CwlD |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.052646 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTCTGA TAATAAAGAA AGACAAGATA GTTTTAATCG GATTGGTCTT TTTGTTGTCG
CTGGCGCTGA TAAGTATTAA CATAGCATCG GGGCAAAATG CAGTCGAAGT TGCAAATGAT
AATGCAGTAA AAAGAACTGT TGTGATTGAC GCGGGGCATG GGGGAGAAGA TCCCGGAGCA
GTAAGTGATT ACAGCGGACT TAAAGAAAAG GATGTAAATC TTGCTATTGC GAAAAAGGTC
AAGGAACTTT TGGAAGCAGA GAACTTCAAT GTTATTATGA CCAGGGAAGA GGATGTACTT
AAGTACAAAG AAGGGACCCA AGGATATACC AGCAAAAGAG GGCAGGACCT CACGGCACGT
AAAAAGCTGA TAGACGAATC AGGAGCTGAT ATTGCGGTAA GCATACATTT GAACAAGTTC
ACCCAGCCAC AGTCCCATGG AGCCCAGGTT TTCTTCCCTC CGAGATCAGA AGAAAGCAAG
AAGCTTGCAG ATTGTATACA GAAGTCACTG AGGGAAAATG TTGACCCTGA TAATAAAAGA
GAGGCACTGG TAAAGGATAC GAAACTGATA ATTCTCAGAA ATTTAAAGGT CCCCACGGTA
ATAGTCGAAT GCGGTTTTCT TTCCAACAGA GAAGAAGAGA AGAAGCTTGC CGACAAGGAA
TATCAGGAAA AGCTGGCCCA AGCAATAAAA GAAGGAATAG TGAAATATTT TGAACAGCAA
TAG
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| Protein sequence | MILIIKKDKI VLIGLVFLLS LALISINIAS GQNAVEVAND NAVKRTVVID AGHGGEDPGA
VSDYSGLKEK DVNLAIAKKV KELLEAENFN VIMTREEDVL KYKEGTQGYT SKRGQDLTAR
KKLIDESGAD IAVSIHLNKF TQPQSHGAQV FFPPRSEESK KLADCIQKSL RENVDPDNKR
EALVKDTKLI ILRNLKVPTV IVECGFLSNR EEEKKLADKE YQEKLAQAIK EGIVKYFEQQ
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