Gene Cthe_1801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1801 
Symbol 
ID4809785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp2127963 
End bp2128727 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content44% 
IMG OID640107215 
ProductABC transporter related protein 
Protein accessionYP_001038215 
Protein GI125974305 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1122] ABC-type cobalt transport system, ATPase component 
TIGRFAM ID[TIGR01166] cobalt transport protein ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.447386 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCATC ACAAACTTGA AGTGAAGAAT TTAAGCTTTA CCTATCCGGA CGGTCATAAA 
GCAATTGACG GAATATCTTT TACTGTCCGT CATGGAGAGT CGGTCGGGAT TGTAGGAGAA
AACGGCGCGG GGAAATCCAC GTTGCTCCTT GTACTTATGG GAGTTCTTTT TCCAAACCAG
GGCGAGGTGA GAGTGGGTGA TGTTCGTGTC ACGAAAAAAA CATTGCCCTT AATTCGTCAA
AGGCTGGGAA TGGTTTTTCA AAATCCTGAT GATCAGTTGT TTATGACCAC GGTTTATGAT
GATGTGGCTT TTGGCCCAAG AAATTACAAG TTGGATGAAA AAGAAGTTGA GGACAGGGTA
ATGAAGTCCC TGGATATGGT TGGGATATCC CACTTGAAAG ATAAGGCACC GTACAAACTT
TCAGGAGGAG AAAAGCGGGC TGCGGCAATT GCAACGGTTT TGTCAATGCA GCCGGACATA
CTTGTTATGG ATGAGCCCAC TTCAAGTCTT GACCCCAGAT CCAGGCGAAG GGTAATGGAG
CTTCTTAAAA ATTTTGAACA TACCAAGATA ATTACCAGCC ATGATTTGGA CATGGTGCTT
GAAATATGCG AAAGAACTAT TGTATTAAAG CAAGGCAAAG TAGCGGCGGA CGGACTGACA
TCCGAAATTC TTGCGGACAA AGAACTTATG AACACATGCG GGCTTGAGGT TCCCCTGGCG
CTTCAAGGTT GTCCGGTGTG CGGAGAAAAA AAGAAATATG TTTAA
 
Protein sequence
MSHHKLEVKN LSFTYPDGHK AIDGISFTVR HGESVGIVGE NGAGKSTLLL VLMGVLFPNQ 
GEVRVGDVRV TKKTLPLIRQ RLGMVFQNPD DQLFMTTVYD DVAFGPRNYK LDEKEVEDRV
MKSLDMVGIS HLKDKAPYKL SGGEKRAAAI ATVLSMQPDI LVMDEPTSSL DPRSRRRVME
LLKNFEHTKI ITSHDLDMVL EICERTIVLK QGKVAADGLT SEILADKELM NTCGLEVPLA
LQGCPVCGEK KKYV