Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_1798 |
Symbol | |
ID | 4809782 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 2123408 |
End bp | 2124061 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640107212 |
Product | redox-sensing transcriptional repressor Rex |
Protein accession | YP_001038212 |
Protein GI | 125974302 |
COG category | [R] General function prediction only |
COG ID | [COG2344] AT-rich DNA-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTGG ATAAAAAAAT TTCCATGGCA GTAATCAGAC GTTTACCCAG GTACTACAGA TACCTTTCTG ATCTTTTGAA GCTTGGGATA ACAAGGATAT CTTCAAAGGA ATTAAGTTCC AGGATGGGAA TAACTGCATC TCAGATACGT CAGGATTTGA ACTGTTTTGG AGGATTTGGA CAACAGGGGT ACGGATACAA TGTCGAGTAT CTGTATAAGG AAATAGGCAA TATTCTTGGT GTAAATGAAG CGTTTAAAAT TATTATCATC GGAGCCGGAA ATATGGGCCA GGCTCTAGCA AATTACACCA ATTTCGAAAA AAGAGGCTTT AAGCTTATAG GTATTTTTGA TATAAATCCA AATTTGATAG GTAAGAAAAT AAGAGATGTG GAGATTATGC ATCTTGACAG TTTGGACCGG TTCGTGGCGG AAAATCAGGT TGATATTGCA ATTCTTTGTG TTCCGTACGA AAACACTCCA GCAGTGGCCG ACAAAGTGGC ACGGCTTGGT GTCAAAGGAT TGTGGAATTT CTCTCCTATG GATTTGAAGC TCCCTTACGA TGTTATAATC GAAAATGTTC ACTTAAGCGA CAGTCTTATG GTTTTGGGAT ACAGATTGAA TGAAATGCGC AAAAGTCAAA GAAATAAGTC GTAA
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Protein sequence | MNLDKKISMA VIRRLPRYYR YLSDLLKLGI TRISSKELSS RMGITASQIR QDLNCFGGFG QQGYGYNVEY LYKEIGNILG VNEAFKIIII GAGNMGQALA NYTNFEKRGF KLIGIFDINP NLIGKKIRDV EIMHLDSLDR FVAENQVDIA ILCVPYENTP AVADKVARLG VKGLWNFSPM DLKLPYDVII ENVHLSDSLM VLGYRLNEMR KSQRNKS
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