Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_1572 |
Symbol | |
ID | 4810079 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 1900668 |
End bp | 1901471 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640106990 |
Product | ABC transporter related protein |
Protein accession | YP_001037991 |
Protein GI | 125974081 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAAAA ACTTATCGGT AATCAGTGAT ATTATTTTAC ATATAGAAAA TGTAAATTAC ACTTATTATG ACGACGCCGG AAACCATGTT GAGGTACTTC GGGATATCAA TTTGTCCGTC CGCCGGGGAG AATTCCTTTC CATCATAGGT TCCTCCGGTT GCGGAAAGAC GACGCTCTTA CGGCTTATAG CAGGTCTTGA CAAGCCGGAA ACAGGAACCC TGATTCTTAA CGGAGAGCAA ATCTCCGGAC CAGATCCAGA GCGGGGCTAC GTTTTTCAGC ATGGAGGTCT TTTTCAATGG CTGACTGTTG AGAAAAATAT CGCAACCGGA CTTAAGGCAC GCCATGTTTA TAGGGAGAAT AAACACCGTA TTGCCCATTA TATAGACCTG ATTGGACTTA AGGGGTTTGA AAAATGTTAC CCGCATCAGT TAAGCGGAGG TATGGCTCAG AGAGTTGCTA TTGCCAGGGC ATTGATCAAT AATCCAAAGG TACTGCTTCT TGATGAACCC ATGAGTGCCT TAGATTCCTT TACCCGTTCC GATATTCAGG ATAAATTGCT TGAGCTTCAT AAAGAAAATA AAACGACAAT GATTCTGGTA ACCCACGATG TGGACGAAGC AATCTATCTT TCCGACCGTA TTGTGGTTAT GACTCCGCGG CCCGGAAAAA TCAGTGAGAT CATGGAGATT AATCTCCCAC ATCCTCGGCA TCGTGGAGGA ACCGAATTTC TTTCCCTTCG ACGGAATATA TTAGAAAAAC TGCATCTGGC AAGTGCGCTG CCACAGCCGG AATATACCAT ATAG
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Protein sequence | MSKNLSVISD IILHIENVNY TYYDDAGNHV EVLRDINLSV RRGEFLSIIG SSGCGKTTLL RLIAGLDKPE TGTLILNGEQ ISGPDPERGY VFQHGGLFQW LTVEKNIATG LKARHVYREN KHRIAHYIDL IGLKGFEKCY PHQLSGGMAQ RVAIARALIN NPKVLLLDEP MSALDSFTRS DIQDKLLELH KENKTTMILV THDVDEAIYL SDRIVVMTPR PGKISEIMEI NLPHPRHRGG TEFLSLRRNI LEKLHLASAL PQPEYTI
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