Gene Cthe_1536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1536 
Symbol 
ID4810043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp1862417 
End bp1863334 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content47% 
IMG OID640106955 
ProductABC transporter related protein 
Protein accessionYP_001037956 
Protein GI125974046 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTGTCC TGGAAATCAG ACAGCTTTAT AAGAGCTTTG GGCACCATGA GGTGCTGAAG 
GGATTGGATA TGGATGTCCC CGAGCATTCC ATATTCGGAT TTGTCGGGCA GAACGGCGCC
GGCAAAACGA CAACAATGAA AATTATTCTT GGGCTATTGA AGCCGGACAG CGGTTCTGTA
ACCGTATGCG GTGAAAAAGT TACGTATGGC GAATCCAAAG CCAACCGCCA CATAGGGTTT
CTTCCGGATG TTCCGGAGTT TTATGGATAC ATGAATCCAA TGGAATATTT GAAGCTGTGC
GGTGAGATAG CCGGCCTTTC GAAGACCCAA ATTAAGTCAA GGAGCGAGGA GTTACTGGAA
CTTGTCGGAC TGAAGGACCA AAAAAAGAGA ATTAGCGGGT TTTCCAGAGG AATGAAGCAG
CGCCTTGGCA TTGCACAGGC CTTGCTGAAT GAGCCAAAGC TCCTAATCTG CGATGAGCCT
ACATCAGCAC TTGATCCAAT CGGCAGGAAG GAAATACTCG ATATTTTGCT TGCGGCAAAA
GGGAAGACGA CCATCGTATT TTCGACCCAT ATTCTATCGG ATGTTGAAAG GATATGCGAC
CGTATTGCGG TATTGCATGA CGGAAAGCTT GCGCTTTGCG GTACACTTTC GGAAATAAAG
GAGCGCCATA GGCTCCATGG TTTTATCCTT GAGTTCGAGA ATGAAGAAGC AGCTTCCTGT
TTCGAAAATA CGGAAGAGCT GAAGCAGCCG TCAATCAGTC TGTCACGGGA TGGAAGCACG
GTAAAGGTGT TTATGAAAGA TGGCGGTATG GACGGGCATT TTTTGTTGGG TGTGCTATCG
CAAAAGCGTA TTGTTCCGTT GAAATTCGCA GTGATGGAAC CGACTTTGGA AAGTTTGTTT
ATGGAGGTGG TTCGGTGA
 
Protein sequence
MGVLEIRQLY KSFGHHEVLK GLDMDVPEHS IFGFVGQNGA GKTTTMKIIL GLLKPDSGSV 
TVCGEKVTYG ESKANRHIGF LPDVPEFYGY MNPMEYLKLC GEIAGLSKTQ IKSRSEELLE
LVGLKDQKKR ISGFSRGMKQ RLGIAQALLN EPKLLICDEP TSALDPIGRK EILDILLAAK
GKTTIVFSTH ILSDVERICD RIAVLHDGKL ALCGTLSEIK ERHRLHGFIL EFENEEAASC
FENTEELKQP SISLSRDGST VKVFMKDGGM DGHFLLGVLS QKRIVPLKFA VMEPTLESLF
MEVVR