Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_1536 |
Symbol | |
ID | 4810043 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 1862417 |
End bp | 1863334 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640106955 |
Product | ABC transporter related protein |
Protein accession | YP_001037956 |
Protein GI | 125974046 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTGTCC TGGAAATCAG ACAGCTTTAT AAGAGCTTTG GGCACCATGA GGTGCTGAAG GGATTGGATA TGGATGTCCC CGAGCATTCC ATATTCGGAT TTGTCGGGCA GAACGGCGCC GGCAAAACGA CAACAATGAA AATTATTCTT GGGCTATTGA AGCCGGACAG CGGTTCTGTA ACCGTATGCG GTGAAAAAGT TACGTATGGC GAATCCAAAG CCAACCGCCA CATAGGGTTT CTTCCGGATG TTCCGGAGTT TTATGGATAC ATGAATCCAA TGGAATATTT GAAGCTGTGC GGTGAGATAG CCGGCCTTTC GAAGACCCAA ATTAAGTCAA GGAGCGAGGA GTTACTGGAA CTTGTCGGAC TGAAGGACCA AAAAAAGAGA ATTAGCGGGT TTTCCAGAGG AATGAAGCAG CGCCTTGGCA TTGCACAGGC CTTGCTGAAT GAGCCAAAGC TCCTAATCTG CGATGAGCCT ACATCAGCAC TTGATCCAAT CGGCAGGAAG GAAATACTCG ATATTTTGCT TGCGGCAAAA GGGAAGACGA CCATCGTATT TTCGACCCAT ATTCTATCGG ATGTTGAAAG GATATGCGAC CGTATTGCGG TATTGCATGA CGGAAAGCTT GCGCTTTGCG GTACACTTTC GGAAATAAAG GAGCGCCATA GGCTCCATGG TTTTATCCTT GAGTTCGAGA ATGAAGAAGC AGCTTCCTGT TTCGAAAATA CGGAAGAGCT GAAGCAGCCG TCAATCAGTC TGTCACGGGA TGGAAGCACG GTAAAGGTGT TTATGAAAGA TGGCGGTATG GACGGGCATT TTTTGTTGGG TGTGCTATCG CAAAAGCGTA TTGTTCCGTT GAAATTCGCA GTGATGGAAC CGACTTTGGA AAGTTTGTTT ATGGAGGTGG TTCGGTGA
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Protein sequence | MGVLEIRQLY KSFGHHEVLK GLDMDVPEHS IFGFVGQNGA GKTTTMKIIL GLLKPDSGSV TVCGEKVTYG ESKANRHIGF LPDVPEFYGY MNPMEYLKLC GEIAGLSKTQ IKSRSEELLE LVGLKDQKKR ISGFSRGMKQ RLGIAQALLN EPKLLICDEP TSALDPIGRK EILDILLAAK GKTTIVFSTH ILSDVERICD RIAVLHDGKL ALCGTLSEIK ERHRLHGFIL EFENEEAASC FENTEELKQP SISLSRDGST VKVFMKDGGM DGHFLLGVLS QKRIVPLKFA VMEPTLESLF MEVVR
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