Gene Cthe_1516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1516 
Symbol 
ID4810554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand- 
Start bp1840229 
End bp1841260 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content46% 
IMG OID640106936 
Productribosome small subunit-dependent GTPase A 
Protein accessionYP_001037937 
Protein GI125974027 
COG category[R] General function prediction only 
COG ID[COG1162] Predicted GTPases 
TIGRFAM ID[TIGR00157] ribosome small subunit-dependent GTPase A 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.000547316 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAATTTGA TAGATTACGG ATTTGTTCCG ACAATGATGC CGGAAGATGT CAGTGGTATT 
CCTGCGAGAA TTACCGCAGT GCATAAGGAA AGATATGAAC TGGTTTGTGA ATATGGATAT 
ACATTTGGAA GACTAAAAAC AAGCATATAT TATGCCGGTG GATTTGAAGA TTTTCCGACG 
GCCGGTGATT TTGTACTCAT AGATTACAAT CCAGATGGTG ACAGCCGGAT TGTAAAGACC 
CTTAAAAGGA AATCTTTCTT TTCAAGGCGC AATCCCACGC CCGGGAAGGG AGAACAAGCA 
GTTGCCGCAA ACTTTGACTA TGTGTTTGTC ATGCAATCGC TTAACCATGA TTTTAACCTC 
AGGCGTATGG AACGCTATGT TACTTTGGCG TGGCAGTCCG GAGCGGTACC CGTGATTGTA 
TTGACAAAAG CCGACTTGGT AGAGGATTGT TCTGAACAAG TTTTGGCATC GCAAAAGGTT 
GCTCCGGGAG TCGAAGTACA TGCAATAAGC ACAATAACCG GTTTTGGGCT GGATGTGCTG 
AAAGATTACT TAAAGCCCTG CAAAACGGTT GTTTTTCTTG GTTCATCCGG TGTTGGCAAA 
TCAAGTCTTG TCAATGCTCT TGCAGGACAA GAGATTATGG CTGTGGGTGA TATTCGTGAA 
GATGATTCGA AAGGCCGCCA CACAACCACT CATCGGCAGC TTATTATGCT GCCGGGCGGA 
GCCATGATTA TTGACACACC CGGCATGCGC GAGCTTGGCA TGTTGGATGA TGTAAGCGTT 
GGCCTTGGTG AAACATTCAG TGATGTGGTG AGTTATTTGG GACGGTGTAA GTTTAGCGAT 
TGCAGGCATC AAACCGAGCC GGGCTGCGTA GTTCGGGCGG CGATTGAGAG AGGTGAGCTT 
CCGAAAGAAC GCTGGGAAAG TTATTTGAAG CTTAAGCGGG AAGCAAACTT TTCGGATGAC 
AAGGAAGGAT ATTTGCGTCA AAAACAGCAA TGGAGCAAGA AAATGAAAAA GAATGGGGGA 
ATCAGGAAAT GA
 
Protein sequence
MNLIDYGFVP TMMPEDVSGI PARITAVHKE RYELVCEYGY TFGRLKTSIY YAGGFEDFPT 
AGDFVLIDYN PDGDSRIVKT LKRKSFFSRR NPTPGKGEQA VAANFDYVFV MQSLNHDFNL 
RRMERYVTLA WQSGAVPVIV LTKADLVEDC SEQVLASQKV APGVEVHAIS TITGFGLDVL 
KDYLKPCKTV VFLGSSGVGK SSLVNALAGQ EIMAVGDIRE DDSKGRHTTT HRQLIMLPGG 
AMIIDTPGMR ELGMLDDVSV GLGETFSDVV SYLGRCKFSD CRHQTEPGCV VRAAIERGEL 
PKERWESYLK LKREANFSDD KEGYLRQKQQ WSKKMKKNGG IRK