| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1500 |
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| Symbol | |
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| ID | 4810538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 1822430 |
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| End bp | 1824322 |
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| Gene Length | 1893 bp |
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| Protein Length | 630 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640106920 |
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| Product | ABC transporter related protein |
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| Protein accession | YP_001037921 |
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| Protein GI | 125974011 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000079767 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCCGG GCAGAGGGAA AATGTCAGGA GGCTTTGGCG GACCCGGCGG GAAAAGACCG
CTTGGATTTG GTGGTCCAAG AGGTATGCGC GGTGCTGTGG GCGGTGCCAA ACCGAAAAAT
GCATCGGCTA CAATTAACAG GCTGCTGGCT TATATCGGAC GGGACAAGAT TAAAATTCTG
TTTGTTTTTG CGTGTGTACT GGGCAGCAGC CTGGCAAGCC TTGCCGGAAG CTATATTTTA
CGTCCTGTCA TAAACAATCT GGTTTATTCC GACGGAACTG CAAAAGAAAA AATAAACAAT
CTTGTAATCG GTATACTTAC CATGGCATGC ATTTATTTGG CCGGAGTGGT ATGTTCTTAC
CTGCAGCAGA GAATCATGAT AGGAGTTTCG CAGAATGCGC TGATTAGAAT CAGGGAAGAG
TTGTTTCGCA AGATTCAAAA GCTGCCTTTA AAATATCATG ACACTCACAC TCACGGTGAT
ATAATGAGCC GTTTTACCAA TGACCTTGAT GCGGTTGGAG AAATGCTCAA TAACACCATG
TCCCAGATTT TTTCAGGTAT TATTACCCTG GTTGGCACTG TTGCTCTTAT GTTTTTTACA
AACTGGATAC TTGCAATCAT TATCATCGTG ACGGTGCCTT TGATGGTCTA CGTGGGAGGC
ATGATCGGAA AGCAGAGCAG AAAATATTTC ATAGGTCAGC AGCAGGCCCT CGGTGCGGTT
AACGGATATA TTGAGGAAAC TGTTACGGGT CAAAAGGTGA TAAAAGTGTT TTGCCATGAA
GAAACAGTAG TGGAAGAATT CGAGTTTTTA AGTGACAATT TGCGTGAAAA ACAGAGAAAG
GCACAGTTTT TTGGAAGTAT TATGGCACCT GTTATGGGTA ATTTAAGCCA AATAAGCTAT
GCGTTGTCTG CCACAATCGG AGGTGTTCTC TGCCTGACGC TGAATTTTGA TATTGGCGGC
CTTGCCATAT TTACTAACTA TTCAAGACAT TTTGCAAGGC CGATTAGTGA ATTGTCCATG
CAGATGAATA CGATTTACGC GGCATTGGCC GGAGCGGAGA GAGTGTTTGA AGTGATGGAT
GAAACACCTG AGAAGGGTGA TTCCCCGGAC GCTATAGAAA TCTGTTCCGA AGCAAACCGG
GTGGAAGGAG CACAGCCAAT TAAAGGAGAA GTGGTGTTGA AAAACGTAAC CTTTGGTTAT
GTACCGGGAA AAACCGTGCT GAAAAATATT AATGTAACAG CCAAACCCGG CCAGAAAATC
GCTTTTGTGG GTTCCACGGG TGCCGGGAAA ACGACCGTTA CGAACCTTAT AAACAGGTTT
TATGAGATTG AAGAAGGAGA AATACTGATT GACGGTATCA ATATCAAGAA TATTAAAAAG
GACTCATTAA GAAGCAATAT AGCAATAGTG CTTCAGGATA CCCATTTGTT TTCCGGAACG
GTCAGAGAGA ATATTCGGTA TGGCCGTCTT GACGCAACCG ATGAAGAAGT CGTTGCAGCG
GCCAAGGTGG CCTGCGCCCA TTCCTTTATC GAAAGGCTGC CCCAGGGATA TGATACGGTA
TTGGATGGGG ACGGAGCGAA TTTGAGCCAG GGTGAACGGC AACTTCTCAA TATTGCGCGG
GCTGCCATAT CAAAAGCTCC CATTCTGATA CTGGACGAAG CCACCAGTTC GGTTGACACG
AGGACCGAAA AATACATTGA GCGTGGTATG GACAGGTTGA TGAAAAACCG GACTACTTTT
GTAATCGCGC ACAGACTGTC CACCGTGCGA AACGCAGATC TGATTATAGT GCTGGAACAC
GGTGAAATTA TAGAACAGGG AACCCATGAA GAACTCCTTG GGATGGGCGG AAGATATTAT
CAGCTTTATA CAGGAGCGGT TGAACTGGAC TAG
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| Protein sequence | MKPGRGKMSG GFGGPGGKRP LGFGGPRGMR GAVGGAKPKN ASATINRLLA YIGRDKIKIL
FVFACVLGSS LASLAGSYIL RPVINNLVYS DGTAKEKINN LVIGILTMAC IYLAGVVCSY
LQQRIMIGVS QNALIRIREE LFRKIQKLPL KYHDTHTHGD IMSRFTNDLD AVGEMLNNTM
SQIFSGIITL VGTVALMFFT NWILAIIIIV TVPLMVYVGG MIGKQSRKYF IGQQQALGAV
NGYIEETVTG QKVIKVFCHE ETVVEEFEFL SDNLREKQRK AQFFGSIMAP VMGNLSQISY
ALSATIGGVL CLTLNFDIGG LAIFTNYSRH FARPISELSM QMNTIYAALA GAERVFEVMD
ETPEKGDSPD AIEICSEANR VEGAQPIKGE VVLKNVTFGY VPGKTVLKNI NVTAKPGQKI
AFVGSTGAGK TTVTNLINRF YEIEEGEILI DGINIKNIKK DSLRSNIAIV LQDTHLFSGT
VRENIRYGRL DATDEEVVAA AKVACAHSFI ERLPQGYDTV LDGDGANLSQ GERQLLNIAR
AAISKAPILI LDEATSSVDT RTEKYIERGM DRLMKNRTTF VIAHRLSTVR NADLIIVLEH
GEIIEQGTHE ELLGMGGRYY QLYTGAVELD
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