Gene Cthe_1477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1477 
Symbol 
ID4810627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp1795782 
End bp1796318 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content37% 
IMG OID640106898 
ProductdCTP deaminase 
Protein accessionYP_001037899 
Protein GI125973989 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0717] Deoxycytidine deaminase 
TIGRFAM ID[TIGR02274] deoxycytidine triphosphate deaminase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATATTAT CAGATAAAAC AATACTTAAA ATGTTGGCAG AAAAAACTTT AATTATAGAG 
CCGTTAGAGA AAGAGCAGAT TCAGCCTGCA AGCGTAGATA TTCGTTTGGG GAACACTTTC
AGTATTGTTG AAGATTCGTG TACCGGCATA ATAAATTTAG AAAAAGAAGT AAAGTATAAA
ACGATCACAA GCGACACATA TATACTTTTG CCAAATCAAT TTGTTCTTGC AACAACAATG
GAATACTTTG AGCTGCCAAA CAATTTGACG GCTTTTGTTG AGGGGCGGAG CTCACTGGGA
AGATTGGGTT TGTTTATACA GAATGCAGGA TGGGTTGACC CGGGTTTTAA AGGAGAAATA
ACTCTTGAGC TTTTTAATGC CAATCGCTGC GCTATTGAAC TTAAAGCAGG AAGAAGAGTC
GGTCAACTTG TTTTTGCTAA AATGGATGAT ACCGCTTTAA ATCCGTATAA AGGAAAATAT
CAAGGTCAAA AAGGTGCTAC GGGTTCAAGA GTTTTCCTGG ATTATGAAGT CAAATGA
 
Protein sequence
MILSDKTILK MLAEKTLIIE PLEKEQIQPA SVDIRLGNTF SIVEDSCTGI INLEKEVKYK 
TITSDTYILL PNQFVLATTM EYFELPNNLT AFVEGRSSLG RLGLFIQNAG WVDPGFKGEI
TLELFNANRC AIELKAGRRV GQLVFAKMDD TALNPYKGKY QGQKGATGSR VFLDYEVK