Gene Cthe_1433 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1433 
Symbol 
ID4810583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp1754585 
End bp1755358 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content44% 
IMG OID640106856 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001037857 
Protein GI125973947 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAAA GAGATTTGTT TTCCTTAAAA GGCAGAGTTG CAGTAGTCAC GGGAGCATCA 
TCGGGACTTG GTGTTCAAAT GGCCAAAGCT CTTGCAGCCC AGGGAGCTGA TATTGTTATT
TTGGCGAGAC GCAAGGAAAA ACTTGAGAAG GTCGCGGAAG AGATCCGGCA ATTTGGAGTA
AGATGCCTTC CCATAGAGTG TGATGTAACG AAAATCGAAA TGGTCAGAAA AGCTGCCGAG
CTTGCCGAAA AAGAATTCGG AAAAGTTGAC ATTTTAATAA ACAATGCAGG CAGCGGTGGT
ATAGCCCCGG CTGAGGAAAC AAGCGATGAA ATGTGGAGCA ATACAATTAA TGTCGATCTC
AGCGGAGTTT TTATGGTTGC CCGGGAATTT GGCAAAATTA TGATAAAAAA CAAGTATGGA
AGAATTATTA ATATTTCTTC CATATACGGC ATGGTTGGTA ACATGGCACA TCCAAGCGCT
GCTTATCATG CGGCCAAAGG CGGTGTGATA AATCTTACAA GAGCTTTGGC GGCAGAGTGG
GCAAAATACG GCATTACGGT AAATGCAATA TGCCCGGGTT ATTTTGTTAC GGAGCTTACC
GAGGACGTTC TTAACACTGA ATATTTCACC AATTACATGA AATCCACTGT TCCTATGGGA
CGCTACGGAA AAGAAGGAGA GTTGGATTCA ACCGCTGTCT ATCTTGCATC TGATGCATCT
TCCTATGTTA CGGGCGCTGT TATTCCGGTA GACGGTGGGT ATACATGCGT ATAA
 
Protein sequence
MQKRDLFSLK GRVAVVTGAS SGLGVQMAKA LAAQGADIVI LARRKEKLEK VAEEIRQFGV 
RCLPIECDVT KIEMVRKAAE LAEKEFGKVD ILINNAGSGG IAPAEETSDE MWSNTINVDL
SGVFMVAREF GKIMIKNKYG RIINISSIYG MVGNMAHPSA AYHAAKGGVI NLTRALAAEW
AKYGITVNAI CPGYFVTELT EDVLNTEYFT NYMKSTVPMG RYGKEGELDS TAVYLASDAS
SYVTGAVIPV DGGYTCV