Gene Cthe_1426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1426 
Symbol 
ID4810576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp1747073 
End bp1747807 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content42% 
IMG OID640106849 
ProductAzlC-like protein 
Protein accessionYP_001037850 
Protein GI125973940 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1296] Predicted branched-chain amino acid permease (azaleucine resistance) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000261082 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAAA GTCAAACAAA AATAAATGAT TTTGTCTATG GATTTAAAAA AGGAACACCG 
ATTCTATTAG GATACATACC GGTAGCTTTT ACTTTCGGCC TTATGGCTGT CGGCGGCGGA
CTTCATCCGT TAATGGCAGT GTTTATTTCC CTGACCAACC TTACCAGCGC AGGGCAGTTT
GCCGGTACAA ATTTAATTAT CCAGGGTGCG GGTTATCTTG AAATTGCCCT TACCACCTTC
GTTATAAATA TCAGGTACAT GCTGATGTCT CTTTCTCTGT CTCAAAAAAT CGATCCAAAG
ATTACACTTT GGCAGCGTCT TGTCTTCGGA TTTGGAATAA CCGACGAAAC CTTTTCGGTG
GCTTCAATGG AAAAAGGAAG GTTGTCTTAT TTCTATATGT TGGGGCTAAT CGCAGGACCA
ATTTTCGGCT GGAGTTTCGG AACGGCTTTA GGTGCCTTCA CCAGTTCCGC ATTGCCCGAA
TCCCTGAGCA ATGCAATGGG TATTGCCTTG TTCGCCATGT TTATTGCAAT AATAGTTCCG
CCTGCAAAAA AATCCAGACC GGTTCTGATG ATTGTACTTA TTTCAGTTGC GATAAATCTG
GCTTTAAAAT ATATCCCTCT CTTTAGCTTT ATTTCAAGCG GTTTTGCTAT TATTATTTCC
ACCGTACTTG GTGCCGGAAT CGGTGCCGCC ATATGGCCCA TAAAAGAAGA AAATCCCGTT
TTAAAGGAGG AGTAA
 
Protein sequence
MNKSQTKIND FVYGFKKGTP ILLGYIPVAF TFGLMAVGGG LHPLMAVFIS LTNLTSAGQF 
AGTNLIIQGA GYLEIALTTF VINIRYMLMS LSLSQKIDPK ITLWQRLVFG FGITDETFSV
ASMEKGRLSY FYMLGLIAGP IFGWSFGTAL GAFTSSALPE SLSNAMGIAL FAMFIAIIVP
PAKKSRPVLM IVLISVAINL ALKYIPLFSF ISSGFAIIIS TVLGAGIGAA IWPIKEENPV
LKEE