Gene Cthe_1402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1402 
Symbol 
ID4809063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand- 
Start bp1719700 
End bp1720179 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content34% 
IMG OID640106825 
ProductDtxR family iron dependent repressor 
Protein accessionYP_001037826 
Protein GI125973916 
COG category[K] Transcription 
COG ID[COG1321] Mn-dependent transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.000267968 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAACA GCGAATTTCA CACGGTCAGA GGATATCAGC TTATCGAACA GGAGAAAAAA 
CTTCTGACAT CTGCCATGGA GGATTATCTT GAAATGATTT TCAGAAATAT AAAAAAGGAA 
GGATATATGC GCATCAATAC GTTGGCGGAG ATGTTGAATG TAAGGCCTTC ATCGGCAACT 
AAAATGGTTC AAAAACTTTC TGAAAAAGGA TTTGTAGAGT ATAAGAGGTA TGGTATTATT 
ACTCTTACAG AAAAAGGAAA AGCACTGGGC GAGTTTCTTC TGAAAAGGCA CAATATAATT 
GAAAAATTTT TAAGAAGTAT CGGAATCAGT GACAACCTTT TGATAGAAAC GGAGCTTATT 
GAACATAATC TCAGTGTTGA CACTTTAAGA AGTATTGATG AGCTGAACAG CTTTTTTGAA 
GAGTATCCTG AAATTTTGGA AAAATTCCGG CGATATAAAA ATAAAAAAGC AAAGAAATAA
 
Protein sequence
MENSEFHTVR GYQLIEQEKK LLTSAMEDYL EMIFRNIKKE GYMRINTLAE MLNVRPSSAT 
KMVQKLSEKG FVEYKRYGII TLTEKGKALG EFLLKRHNII EKFLRSIGIS DNLLIETELI 
EHNLSVDTLR SIDELNSFFE EYPEILEKFR RYKNKKAKK