Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_1352 |
Symbol | |
ID | 4809347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 1644326 |
End bp | 1645657 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640106776 |
Product | UDP-glucose 6-dehydrogenase |
Protein accession | YP_001037777 |
Protein GI | 125973867 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1004] Predicted UDP-glucose 6-dehydrogenase |
TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000465012 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATATGA TACCAAAAGT TGCAATGTTT GGTACCGGTT ATGTTGGGCT TGTATCCGGA GTATGTATAG CCGATTTCGG CATAAACGTC ATTTGTGTTG ATGTTGACAA AGAAAAGATT GACGGGCTCA ATAATGGGAA GATTCCTATT TACGAACCAG GACTTGACGT TTTCCTTGAA AGAAATATAA AAGCAGGAAG AATACAATTT ACTACAGATG CAAAAATGGC AATAGAAGAA TCCAATGTTT TGTTTATTGC TGTAGGCACA CCTCCGAAGG AAAACGGAGA GGCTGACATG CAGTATGTAT ATGCTGTTGC TGAAACTATC GGACAGTATA TGAACGGATA TAAAGTTATA GTTGATAAAA GCACTGTACC TGTTGGTACA GGTCAGGTTG TTAAGAAAAT AATAGCCGAC AAGCTTAAAG AAAGAGGAGT CGAATACTCT TTTGATGTTG TTTCAAATCC GGAGTTTCTT CGTGAAGGAA AAGCGCTTTA CGACTTTACT CATCCTGACA GGGTTGTTAT AGGCGTTGAA AGTGAAGAAG TTGCAGAGAT AATGAAAAAG GTATACAGGC CTCTGTATAT CAATGAAACA CCCTTTGTAA TAACCAACAT AGAAACTGCG GAAATGATTA AGTATGCATC CAATGCATTT CTTGCAACCA AGATAACTTT TATAAATGAA ATTGCAAACC TTTGTGAGAA AGTGGGGGCA AATGTTCAGC AGGTCGCAAT GGCCATGGGA AGAGACGGAA GAATAGGTCC AAAGTTCCTG CATGCAGGAC CGGGTTTTGG AGGAAGCTGC TTCCCAAAGG ATACAAAGGC CCTTGTACAA ATAGCTGAGA AGCATGGGGT TCAAATGTCT GTGGTAAATG CGGTAATAGA AGCAAACGAG AGGCAGAAGA AAATGGTGGC TGAGAAACTC GAAAAATTTG CAGGAGATTT AAAAGGTAAA ACAATAGGCA TACTTGGACT TGCGTTCAAA CCCGAAACGG ATGACGTGAG GGAAGCTCCT GCGTTAACAA TAATAGCCGA TTTGATTGAA AGGGGAGCAA GTATCCGCGC GTATGACCCT CAGGCCATGG AGGAGGCTAA AAAAGCTCTC AGAAAATACG CGGATAATAT TACTTACTGC AAGCATGCCT ATGATACTGC CGAGAGTGTG GATGCATTGG TTATAGTTAC GGAATGGCAT GAGTTTCGCA ACATGGACTT GACACTGCTG AAAAAAATAA TGAGGGGAAA TATTTTCTAT GACGCCAGAA ATATATACTC GAGAAAGGAT ATAGAAGAAA AAGGATTTGT GTTTATAGGT ACCGGAGTAT AA
|
Protein sequence | MNMIPKVAMF GTGYVGLVSG VCIADFGINV ICVDVDKEKI DGLNNGKIPI YEPGLDVFLE RNIKAGRIQF TTDAKMAIEE SNVLFIAVGT PPKENGEADM QYVYAVAETI GQYMNGYKVI VDKSTVPVGT GQVVKKIIAD KLKERGVEYS FDVVSNPEFL REGKALYDFT HPDRVVIGVE SEEVAEIMKK VYRPLYINET PFVITNIETA EMIKYASNAF LATKITFINE IANLCEKVGA NVQQVAMAMG RDGRIGPKFL HAGPGFGGSC FPKDTKALVQ IAEKHGVQMS VVNAVIEANE RQKKMVAEKL EKFAGDLKGK TIGILGLAFK PETDDVREAP ALTIIADLIE RGASIRAYDP QAMEEAKKAL RKYADNITYC KHAYDTAESV DALVIVTEWH EFRNMDLTLL KKIMRGNIFY DARNIYSRKD IEEKGFVFIG TGV
|
| |