| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1346 |
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| Symbol | |
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| ID | 4809486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 1638158 |
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| End bp | 1640641 |
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| Gene Length | 2484 bp |
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| Protein Length | 827 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640106770 |
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| Product | single-stranded-DNA-specific exonuclease RecJ |
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| Protein accession | YP_001037771 |
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| Protein GI | 125973861 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000597878 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCAAC GCAGACTGTG GTCAATGAAT GATTTGTCTG ATGAAAAGGT TGAGAAACTT
TCAAAAAAGG CCGGAATTTC AAAGCTCCTT GCCGGAATTT TTTTGTCCAG GGGAGTGGAT
GATCCGGATT ATATAAAAGA TTTTTTAAAT CCTTCACTCG ACAAACTGCA TGATCCTTTT
GAGCTTCGCG ACATGGAAAA AGCTGTGGAC AGAATTGTCA AAGCACTTCG TCAAAACGAA
AAGATTTTGA TTTATGGCGA TTATGATGTG GACGGGATAA CAAGCACATC CATTCTTTAC
GATTTTTTCA GAAGACAAAA TGCGGATGTC TGCTACTATA TCCCTGACCG GTTAAATGAA
GGTTACGGCA TTTCAATGGC TGCCGCAGAA AAAATGCCGG AGATGGACGT GGATCTGGTG
ATTACTGTTG ATTGCGGCAT TACTGCTTTC GAAGAGGTAA AATATATTAC TGACAATAAC
ATAGACATTA TAATAACCGA CCATCATGAG TGCAGGGAAA GTGTTCCTGA TGCTTTAGCG
GTTGTAAACC CTCACAGGTT TGACTGCGCC TATCCTTTTA AAGAACTTGC CGGGGTTGGT
GTTGCCTACA AACTGCTTGA AGCCCTTTCC AAAAAAATGA ATATTCCGGG CTTTGAAAGG
CAGTATCTTG ACCTTGTTGC CCTGGGCACC GTGGCAGATG TGGTTCCCCT TTTGGGCGAG
AACAGAATTA TAGTAAAGTA CGGCCTTCCT ATGATTGAAA AGACTTCAAA TGTTGGTTTG
AGAAGCCTCA TTAAAGTAGC GGGAATAGAG AACAAAGAGA TCAACACTTT TTTAGTTGGC
TTTGTGCTTG CACCGAGGAT AAATGCGGCG GGAAGAATCG GAGATGCGTC GAGGGCTGTG
AGGCTTTTGA CCACGGATAA TGAAGAAGAG GCGTTGGAGA TTGCAAAAGA GCTGGATGAG
CAAAATATAT TCCGCAAACA AAATGAGCTT GAAATAATGG AGGAAGCGGT TAACATTATT
GAGACCGGTA TAGATCTTCA AAGAGAAAAG GTGATTGTGG TTGCCGGAGA AAGATGGCAC
CACGGTGTTA TCGGGATAGT GTCATCCAAA ATAACGGAGA GGTATTACAG GCCAAGCGTG
CTTATTTCCG TTGACGGTGA GGGAGCTAAA GGTTCGGCAA GAAGCATTGA AGGATTTAAC
TTGTTTGAGG CCTTGGTTCA TTGCGGGAAG GTTTTGGAGA AGTATGGAGG GCATGAACAG
GCGGCCGGTC TTGCATTAAA GCCGGAAAAC ATTGATGAAT TCAGAAGAAT GATAAATGAA
TATGCCGATT CCGTTTTAGA TGAAGACGAC CTTGTTCCCC GGATGAAAAT CGATGTGCGT
ATAACAAAGG AAGATATGAC CCTAGAAAAC TGCAAGGAAC TTAAGCTTCT TGAACCTTTC
GGGGAAAGCA ATCCTCCCCC TGTGTTCAGA TATGACAATT TAAAAGTCCA TGAAATACGT
CCTGTGGGAC AGGACAGCAG GCATGCAAAG ATAAGGTTTG ATGACAATGG AACTTTGATT
GATGCCATTT GCTTTAACGG AGGCGGACTT ACGGATTGTT ATGAACTATC GGACATTGTG
GATGTTGTGT GTTCCATGGA AATAAATTTA TGGAACGGCA GGGAAAATGT TCAGCTTAAT
ATAAAGGACA TCCGGCCGGG GTTGGCGGTG GAGAGACAAA ACAAATTTTA CTTCAGTCTG
GACCGGTGTA TTGATTTTAT TATTCCACAG GAGGATAATA TTGTTGATGA AGTTTTGGCA
AAGCTACAGA CTGTTGAGTA TCCTGGGGGA ATTGCGGAAG CAATAAGTGC TTTTTTAGCT
GAAGGCGGCA AAACGGCGGT TTTGGTAAAT TCCCCCGAAA GCCTTGAATT TGTTGAAAAT
GCTTTGAAAA AAACTTCGTT GTTTTCCCGA AACAAATATG ATGTTTTTTA TTCTTCCGTA
CCGCAGGATA ATATCAAAGA GGTATCCGTG GTGGTGAATC CCCACCCTGA AGGAGCTTTG
CTATCTAAGT TTGACCGGGT TATATTGTTT GGTGCGTGGA TGTCGAAAGA TTATATATAT
CAAATAGTAC GAAAGATTGA TTTAAAAAAG GTTTATGTTT ATAATAAAAT AATAATCGAT
TTTACTAATG ACGATATTAT ATTGCAAAGG CAGGACATGG CAGCGGTATA CAGGTATTTA
AAATCCTGCT GCCAACAGAA TAATCAAGTT GTTTTGAAAG ACTTGTTTGC GGTTGCCCGG
GAAGTTTCGA AAAAGTACGG TATATCCATG AACTATTTCA AGGTAAAAAG AGCAATACAG
GTTTTTGAAG AATTATCCCT TTTGAATAAA CTTCCTTGTG GTGAGAGGGA ACAGATTATC
GTTTTAAACA ATATGGGAAA TACCAAGACA AATCTTGAAA ACTCTTGTTT TTTTAGAAGC
ATTCAAATGC TGGGGAGCGG ATGA
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| Protein sequence | MKQRRLWSMN DLSDEKVEKL SKKAGISKLL AGIFLSRGVD DPDYIKDFLN PSLDKLHDPF
ELRDMEKAVD RIVKALRQNE KILIYGDYDV DGITSTSILY DFFRRQNADV CYYIPDRLNE
GYGISMAAAE KMPEMDVDLV ITVDCGITAF EEVKYITDNN IDIIITDHHE CRESVPDALA
VVNPHRFDCA YPFKELAGVG VAYKLLEALS KKMNIPGFER QYLDLVALGT VADVVPLLGE
NRIIVKYGLP MIEKTSNVGL RSLIKVAGIE NKEINTFLVG FVLAPRINAA GRIGDASRAV
RLLTTDNEEE ALEIAKELDE QNIFRKQNEL EIMEEAVNII ETGIDLQREK VIVVAGERWH
HGVIGIVSSK ITERYYRPSV LISVDGEGAK GSARSIEGFN LFEALVHCGK VLEKYGGHEQ
AAGLALKPEN IDEFRRMINE YADSVLDEDD LVPRMKIDVR ITKEDMTLEN CKELKLLEPF
GESNPPPVFR YDNLKVHEIR PVGQDSRHAK IRFDDNGTLI DAICFNGGGL TDCYELSDIV
DVVCSMEINL WNGRENVQLN IKDIRPGLAV ERQNKFYFSL DRCIDFIIPQ EDNIVDEVLA
KLQTVEYPGG IAEAISAFLA EGGKTAVLVN SPESLEFVEN ALKKTSLFSR NKYDVFYSSV
PQDNIKEVSV VVNPHPEGAL LSKFDRVILF GAWMSKDYIY QIVRKIDLKK VYVYNKIIID
FTNDDIILQR QDMAAVYRYL KSCCQQNNQV VLKDLFAVAR EVSKKYGISM NYFKVKRAIQ
VFEELSLLNK LPCGEREQII VLNNMGNTKT NLENSCFFRS IQMLGSG
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