Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_1325 |
Symbol | |
ID | 4809465 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 1608211 |
End bp | 1609353 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640106749 |
Product | coproporphyrinogen III oxidase, anaerobic |
Protein accession | YP_001037750 |
Protein GI | 125973840 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTTGATG TAAAGGAACT GGGATTGTAT ATTCATGTAC CGTTTTGCAA AGCAAAGTGT TTTTACTGTG ATTTTAATTC CTTTGCCTGC AGGGATGATT TTGTCCCTGC ATATTTTAAT GCTCTTAAAA AGGAAATTTC AGCCTATTCG GACATCATCA AAGGATACAG GATAAAGACG GTATTTTTTG GAGGGGGAAC ACCTTCCTAC GTTGGAGCGC ATAATATATA TGAAATTGTA TCGCTTTTAA AGCAAAAGTT TGACATGGAC GGCTGTTTTG AACTTACCAT TGAAGCCAAT CCCGGAACTC TGGACGAAGA AAAGCTTTTG GTGTACAGGG ATGCGGGAAT AAACCGGCTG AGCATCGGGC TTCAGGCATG GCAGAATCAC CTGCTTGAAA GCCTGGGGAG AATTCATACT GTGGAAGAGT TTGAAGAAAA TTATCATCTT GCCGTAAAAA CTGGATTTGA CAACATAAAT GTGGATCTTA TTTTTGCAAT TCCGGGGCAG AGTTTTGAGG ATTGGGCGGA GACAATAAAC AAAGTGGCAG AACTTAATCC CCGGCATATT TCCTGCTACA GCCTTATAAT TGAAGAGGAT ACGGTTTTCG GAGCAAAGTT TTCCAAAGGG GAGCTTTCTT CTGTGGAAGA CGAACTTGAC AGGAAAATGT ACTGGTATGC AGTGGAAAAA TTAAGGACCG TGGGATATAA GCACTATGAA ATATCGAATT TTTCAAAAGA AGGATTTGAG TGCGCCCACA ATTTGATTTA CTGGAAGGAA CAAGAATACA TAGGTTTCGG TGCCGGAGCC CATTCTTATT TTAACGGTCA AAGATTCAAC AATACTTATA ATATTGAGGA ATATGTGAAA ATAATAAATT CCGGAAGACT TCCGGTGGAA AATAAGATTG CCATAGGAAG GAAAGATGAA ATTTCCGAAT TTATGATGCT GGGATTAAGA CTTGTTGAAG GGGTGAGTAT CAGGGAATTT TACGAAAGGT TTGGAGAGAA TGTTTTGGAG GTTTTCAAAG AGCAGATAAA AAATTTGTCC AAAAGAGGAC TTGTTGCGGT TGAAAATGGT TTTATAAAAC TTACCCGATT GGGCTTGGAT CTTGCAAATC AAGCCTTTAT GGAGTTTGTG TGA
|
Protein sequence | MFDVKELGLY IHVPFCKAKC FYCDFNSFAC RDDFVPAYFN ALKKEISAYS DIIKGYRIKT VFFGGGTPSY VGAHNIYEIV SLLKQKFDMD GCFELTIEAN PGTLDEEKLL VYRDAGINRL SIGLQAWQNH LLESLGRIHT VEEFEENYHL AVKTGFDNIN VDLIFAIPGQ SFEDWAETIN KVAELNPRHI SCYSLIIEED TVFGAKFSKG ELSSVEDELD RKMYWYAVEK LRTVGYKHYE ISNFSKEGFE CAHNLIYWKE QEYIGFGAGA HSYFNGQRFN NTYNIEEYVK IINSGRLPVE NKIAIGRKDE ISEFMMLGLR LVEGVSIREF YERFGENVLE VFKEQIKNLS KRGLVAVENG FIKLTRLGLD LANQAFMEFV
|
| |