| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1322 |
|---|
| Symbol | dnaK |
|---|
| ID | 4809462 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | - |
|---|
| Start bp | 1604299 |
|---|
| End bp | 1606125 |
|---|
| Gene Length | 1827 bp |
|---|
| Protein Length | 608 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640106746 |
|---|
| Product | molecular chaperone DnaK |
|---|
| Protein accession | YP_001037747 |
|---|
| Protein GI | 125973837 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0443] Molecular chaperone |
|---|
| TIGRFAM ID | [TIGR02350] chaperone protein DnaK |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAAAGG TTATCGGCAT AGATCTTGGA ACGACCAACT CTTGCGTTGC AGTTATGGAA
GGCGGAGAGC CTGTTGTAAT TCCAAATTCC GAGGGTTCCA GAACCACACC TTCAGTTGTG
GCTTTTACAA AAAACAATGA AAGACTTGTG GGACAGGTGG CAAAAAGGCA GGCTATTACG
AATCCTGAAA GAACTATTAT TTCTATTAAA AGGGACATGG GAACTGACAA AAGAGTAAAA
ATTGATGATA AAAGCTATAC TCCCCAGGAG ATTTCGGCAA TGATTCTTCA AAAAATAAAA
GCGGATGCCG AGGCATATTT AGGTGAGAAA GTTACCCAGG CTGTAATAAC AGTGCCGGCA
TATTTCAGCG ACTCTCAAAG ACAGGCTACA AAGGATGCTG GCAGGATCGC AGGTTTGGAA
GTTTTAAGAA TAATCAACGA GCCTACGGCA GCGGCTTTGG CATATGGACT GGACAAGGAA
AGCGACCAGA AAATTCTTGT CTTTGACCTC GGTGGTGGTA CGTTCGACGT ATCCATACTG
GAAATAGGAG ACGGAGTTTT TGAAGTCCTT GCAACAAGCG GTAACAACAG ATTGGGTGGA
GATGACTTTG ACCAAAGAAT AATAGACTAT TTGATAGACC TCTTCAAAAA AGAGCACGGC
ATTGATTTGA GCACTGACAA GATGGCAATG CAGAGACTCA AGGAAGCGGC AGAAAAAGCT
AAAATTGAGC TTTCCGGCGT TACCACCACA AATATAAATC TTCCTTTTAT TACGGCTGAT
GCAAATGGCC CGAAACACCT CGATGTTACG TTGACAAGAG CGAAGTTTGA AGAGTTGACG
GCAGATCTTG TGGAAAAGAC AATGGAACCT ACAAGAAGGG CGTTGGAGGA CTCGGGACTT
ACTCCGGATA AAATTGACAA GATTCTTTTG GTTGGCGGTT CCACAAGAAT ACCGGCCGTA
CAGGAAGCTG TAAGGAAATT CTTTGGCAAG GAGCCCTTTA AAGGAATAAA TCCTGACGAA
TGTGTTGCCA TAGGCGCAGC TATTCAGGCG GGGGTACTTA CCGGAGAAGT AAAAGATCTT
CTGCTTCTTG ATGTAACTCC TCTTTCTCTT GGAATTGAAA CTTTGGGTGG TGTGTTCACA
AAACTTATTG AAAGAAATAC TACGATACCG ACCAAGAAAA GCCAGATTTT CTCAACTGCC
GCAGACGGTC AGACAGCTGT TACCGTAAGG GTATTCCAGG GAGAAAGAGC CATGGCTGCT
GACAACAAGC TTTTGGGAGA ATTTACTCTT GACGGTATAC CACCGGCACC GAAAGGCGTG
CCTCAGATTG AGGTAACCTT TGACATAGAT GCGAACGGTA TTGTGCATGT TTCGGCAAAG
GACCTTGGTA CAGGAAAAGA GCAGCACATA ACCATAACTG CTTCTACGAA CCTGTCCGAA
GCTGAGATAG AAAAAGCTAT AAATGAAGCC AAGAAGTATG AAGAAGAGGA CAGAAAGAGA
AAAGAAAGTG CCGAGACAAG AAACAATGCC GACTCAATGG TATTCCAGGC TGAGAAAACA
TTAAAAGATT TGGGAGATAA ACTTAGCAGT GAAGACAAAG CGAAGATTGA AGCAGAAATA
GAAAAGGTCA GGGAAGCTTT GAAGGGAACG GATACCCAGG CAATCAAGAA AGCAACGGAA
GATTTGCAGC AGGCATTCTA CAGTGTATCG GCAAAAATCT ATCAGCAAGG GCAGGCTGCA
GGTGCAAATC CCGGTGCTCA AACGACCGGC GGAGAACAGG GAAATGTGTA TGACGCCGAG
TACAAGGTAG TGGATGACGA CAAATAA
|
|---|
| Protein sequence | MGKVIGIDLG TTNSCVAVME GGEPVVIPNS EGSRTTPSVV AFTKNNERLV GQVAKRQAIT
NPERTIISIK RDMGTDKRVK IDDKSYTPQE ISAMILQKIK ADAEAYLGEK VTQAVITVPA
YFSDSQRQAT KDAGRIAGLE VLRIINEPTA AALAYGLDKE SDQKILVFDL GGGTFDVSIL
EIGDGVFEVL ATSGNNRLGG DDFDQRIIDY LIDLFKKEHG IDLSTDKMAM QRLKEAAEKA
KIELSGVTTT NINLPFITAD ANGPKHLDVT LTRAKFEELT ADLVEKTMEP TRRALEDSGL
TPDKIDKILL VGGSTRIPAV QEAVRKFFGK EPFKGINPDE CVAIGAAIQA GVLTGEVKDL
LLLDVTPLSL GIETLGGVFT KLIERNTTIP TKKSQIFSTA ADGQTAVTVR VFQGERAMAA
DNKLLGEFTL DGIPPAPKGV PQIEVTFDID ANGIVHVSAK DLGTGKEQHI TITASTNLSE
AEIEKAINEA KKYEEEDRKR KESAETRNNA DSMVFQAEKT LKDLGDKLSS EDKAKIEAEI
EKVREALKGT DTQAIKKATE DLQQAFYSVS AKIYQQGQAA GANPGAQTTG GEQGNVYDAE
YKVVDDDK
|
|---|
| |