| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1244 |
|---|
| Symbol | |
|---|
| ID | 4809749 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 1507662 |
|---|
| End bp | 1508834 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640106667 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_001037669 |
|---|
| Protein GI | 125973759 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGAA AGTATGGTGA GCAAAAATTG AATAAAGAGT TAGTTTCAGT AAGCATATGC
GTTTACAATG GCGAAAAATA TATAGAATCT TCTATAAAAA GCGCCCTTGC GCAAACATAT
CAAAACATAG AAATAATAGT AATTGATGAT GGTTCGACGG ACAGGACGGG CGAGATTGTA
AAAAACTATT GTCCCGATGT TAAATATATC TATCAAGAGA ATAAAGGTGT GTCAGAAGCC
AGGAATACAG GACTTAGGCA CTGCAGCGGA AATTATATTG CATGGTTGGA TGCCGATGAC
TTATATTTAC CGGATAAAAT AAAAGAACAG GTTGATTTTT TACAACAGAA TAAAGATATA
GACTGTGTAT ACAATGACGC TTTTTTAATC GATGCTCACG ACAACTTGGT TAAAGTGCTT
AGAAGCGATT ATGGCAATTT GGCTCCAAAT GATTTTTTGG CACAGCTTCT TTTCAGACAA
ACCATTCCCT GTCCGCCAAG TACCTTGTAT AGAAGAAAGT GTTTTGAAAA CCTGCGTTTT
ATTCCCGGCA TGAGGTATGC GGAAGATTAT TGGAGCAGCA TCCAACTGGC CCAAAGATTC
AAATGTGGAT ATTTGCCTAA AATCCTCTAC AAATACAGAA GGCATGACTC CAACCTGACC
AATAACAAAG AAAAACAAGA AGAAATGGAA ATCAAAGTAG TTAAAAGTCT TGGAATTGAT
AAAATAAAAG ATATCGTAGA AAAGTCTTCT TATCCTGAGC ATGAAAAGCT TTTATTGCTT
GGTAAAATTT TTATCAAAAT CAGTGAATAC GAGGAAGCAT GTAAAGCCTT GGAAAAAATC
CAAGTCCCGG ACTATATTCA GGACAGAAAA ACGAAATTTT TAAAATACTT TTACCTGGGA
AATGTAAACT ATTTGACAAA AGAATATAAC AAAGCAAAAT TTTGCTACGA AAAATCGCTC
CGAACAGACC CCGGCAAAGC AGAAGCATAT AACAATTTGG GTGCGGCATT ATATCACTTG
TCAGAAACTG AGGAAGCACT TGAAAATTTT AATAAAGCAC TCGCTTTGAA AAAAGAATAT
CTCGACCCTC AGAACAACTT AAAAAATATA AAAACAGGCG GGGATTTAAA AATTACAATC
CGGGAGTTGA GAGAAAATTT GATGGTTTAT TAG
|
|---|
| Protein sequence | MKRKYGEQKL NKELVSVSIC VYNGEKYIES SIKSALAQTY QNIEIIVIDD GSTDRTGEIV
KNYCPDVKYI YQENKGVSEA RNTGLRHCSG NYIAWLDADD LYLPDKIKEQ VDFLQQNKDI
DCVYNDAFLI DAHDNLVKVL RSDYGNLAPN DFLAQLLFRQ TIPCPPSTLY RRKCFENLRF
IPGMRYAEDY WSSIQLAQRF KCGYLPKILY KYRRHDSNLT NNKEKQEEME IKVVKSLGID
KIKDIVEKSS YPEHEKLLLL GKIFIKISEY EEACKALEKI QVPDYIQDRK TKFLKYFYLG
NVNYLTKEYN KAKFCYEKSL RTDPGKAEAY NNLGAALYHL SETEEALENF NKALALKKEY
LDPQNNLKNI KTGGDLKITI RELRENLMVY
|
|---|
| |