Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_1161 |
Symbol | |
ID | 4810829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 1378836 |
End bp | 1381238 |
Gene Length | 2403 bp |
Protein Length | 800 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 640106583 |
Product | hypothetical protein |
Protein accession | YP_001037586 |
Protein GI | 125973676 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0419] ATPase involved in DNA repair |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAAAAA GTATTAATAT TGAAAATCTA AGAGGAATTA GATTTAATAC GAACATTGAT TTAAATAAAA AATCTTTAAT TATTTTTGGG GAGAATGGAA AAGGAAAAAG TTCAATTGTT GATGGAATTG AATATGCAAT TACTGGGGAT ATTAAGCATA TTTCTTCAAC ATGTAGAGAA GTATCATTAA AAAAACACGC CCCTCATATA TACGCAGATT TTCAAGAGAT AAAAGTTGAA GTGGAATTTA GTGATGGAAG CGTATTATCT AATTATAAAG AGCCTGAGAA AGGCACATTG GCATATAGAA TAAGAAATAG TAAATTAGGA AACATAAATA TTTTAAGACG CTCTCAACTG TTAGATGCTA TTTCTGCCCA ACCAAAAGAA AGATATGATT TGTTAAAGCA ATTTCTGCCA CTTGCTGAAA TAACAAAATT TGAGAATGCT TTAAAAGGAG TAGTTGATAA GTTTCAAGGG GAAGTAAATA ATCTTAAAAC AGAAATTGAA AATCATATGA GGAACATTCA GGCTGCTCTT GACATAAAGG ATTTAGGTTC TGTTACTTCT GATAATATCT TCTCGATACT TGTAAATAGA GGTAAACAGT TTAACATAGA AGATATAAAA GACTTTAAGG AAATACCGGA ATACATAAAA AAAGTTGATA ATTATATTGA GTGTATGGGA AATATAAATC GAGATGTAAT TATTAGGAAT TTTTTGAATT TGCTTAATGA ACTAATTGAT AAAAAATCAC CTGAACTGTT TGCAAAAGCG ATTTATGATA ATATTAACAC AAAACTTGAT TTGGTTCAGA AAAAGAAAGT TGTTTTTTAC GAGGAATTTC TCACTACAGG TATTCAATGG TTACAGGAAG AAAACAAATC ACTATGTCCA TTTTGTGAAA GTCCGATAGA TGTACCAAGT GTTATAGAAA GAGTAAAGAA GAGAATAAAT GAGAATTCGG AGTATTCAAC ACTTAAAAAG GAGTTTCAAA GAGATTATAG TATATTGCAG TCAGAACTTA AATGGTGGGA AGACAATCTA GACAAGATTA GAAATATAAA CAAAAAAATT AATGATGAAA ATATTGAAAA TTTATGTAAA ACAATTGAAG ATGATATCGA GAATTTCAAG AAATTAGTTC CTAATAGCAT ACAAGAAATC ATTATTGTAA AGAATTTGCC AAATTGGAAT GAATCTATTT ATAAAAATGC TATTCATCTA AAAAATGAGT ATAGTAACAA AGTACTTCCA AAGGATGCCG TGTTATTACT TAACGAAGCA ATTAAATTTA AAAATGATTT AAAAATTGTA TATGACAACA TTGTACATAT AAATAAGAAA ACTAAAGAAA ATACTCTTTT AAATAAAAAA TATAAAATTG CTAAGCAATT TTATGAGGAA TTGGTTCGCC AACGTAAAAA TTCCGTACAA GAAATTTATG ATGAAATTAA AAATGATATT AATAGTTACT ATAGTAGTAT GCATTTTGAA GAGGATATAG GTGATATTGA TTTAAAAATA AAAGATTCTT CAAGCAAGGG AAGTGTCATA ATAGAAGCAA GTTTCTATGA AAAGAGTGGT GAGGACCCGA GAGCATATTA TAGTGAATCA CATCTTGATA CTTTAGGATT GGCAATTTTT CTAGCATTAT ATAAGCGAGA ATGTTCAAAA AATAAAGATT TAAGATTATT AATATTAGAT GATGTGCTTA CATCTGTTGA TGCGGCACAT AGAATCAATA TAATAAACCT TATTTTTTCT GAATTTAAAG AACACCAATT AATTATTACA ACTCATGATA TTGTATTATA TAAGGAAATC CTTGAGTTAG AAAAATTATA TGGAGGAAAT AACAAGTATA GAAATATTGA GATATGTGAA TGGACGAAAG ATAGGGGACC TATATTAGAT GATACTAAGT CAGAAATTGA GAAGTTAAGG GAACATTTAA CTAATCCTCA TACAGATAAA AATATTCTTG CTTCTGCTAC TGGTACTTTT CTGGAACTAG TTTTATGCAA ATTAAGGTAC TCTTTGGAAT TATCAATCCC TGCAAAATAT CAAGATAAAT ATACCATTGT GGATATTTGG GATAACTTAT ACTCTAAATT AAAGAAGAAT AAGGAATTTT ATAGGTTAAA TTCAAAGGTA TTAGATTCCA TCAATGTTTC TAAGTTTATT AGAAATATAA GTGGGTGTCA TTATAATGAA TGGGCTCAAG GAGTATCCAA GGATGAAATA AAACAATTCA CAAATAATGT TATACGGTTT TATGAGATAG TATATTGTAG CATTTGTAAC TCCTTTATAA AAAAGAGTAA TGATAATGAA GATTATCAAT GCAATTGTTC GAGATTGCAA TATAATAAAA AAGACCAATT ATTAATTTCA TAA
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Protein sequence | MLKSINIENL RGIRFNTNID LNKKSLIIFG ENGKGKSSIV DGIEYAITGD IKHISSTCRE VSLKKHAPHI YADFQEIKVE VEFSDGSVLS NYKEPEKGTL AYRIRNSKLG NINILRRSQL LDAISAQPKE RYDLLKQFLP LAEITKFENA LKGVVDKFQG EVNNLKTEIE NHMRNIQAAL DIKDLGSVTS DNIFSILVNR GKQFNIEDIK DFKEIPEYIK KVDNYIECMG NINRDVIIRN FLNLLNELID KKSPELFAKA IYDNINTKLD LVQKKKVVFY EEFLTTGIQW LQEENKSLCP FCESPIDVPS VIERVKKRIN ENSEYSTLKK EFQRDYSILQ SELKWWEDNL DKIRNINKKI NDENIENLCK TIEDDIENFK KLVPNSIQEI IIVKNLPNWN ESIYKNAIHL KNEYSNKVLP KDAVLLLNEA IKFKNDLKIV YDNIVHINKK TKENTLLNKK YKIAKQFYEE LVRQRKNSVQ EIYDEIKNDI NSYYSSMHFE EDIGDIDLKI KDSSSKGSVI IEASFYEKSG EDPRAYYSES HLDTLGLAIF LALYKRECSK NKDLRLLILD DVLTSVDAAH RINIINLIFS EFKEHQLIIT THDIVLYKEI LELEKLYGGN NKYRNIEICE WTKDRGPILD DTKSEIEKLR EHLTNPHTDK NILASATGTF LELVLCKLRY SLELSIPAKY QDKYTIVDIW DNLYSKLKKN KEFYRLNSKV LDSINVSKFI RNISGCHYNE WAQGVSKDEI KQFTNNVIRF YEIVYCSICN SFIKKSNDNE DYQCNCSRLQ YNKKDQLLIS
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