| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1123 |
|---|
| Symbol | |
|---|
| ID | 4811421 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | - |
|---|
| Start bp | 1337687 |
|---|
| End bp | 1338523 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640106545 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001037548 |
|---|
| Protein GI | 125973638 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGAGA TAATAAGTTG CAGCAGAAGA ACGGATATTC CTGCGTTTTA TTATGATTGG
CTTCAGGAAT GTCTGAAAAA TAAATATGTA ATGGTAAAAA ACCCTTACAA TAAACAAACA
TACATGTTGG ACCTGTCTCC TGAAAGGGTT CATTCCATAT GCCTGTGGTC AAAATCGTTT
GCCAATGTAC TTAAAAACCC TGGATATTTG TCGCAGTATA ATCTGTACTT TCAGTTTACA
ATCACAGGCT ATTCCAAATT CCTGGAGCCC AATGTTGCTG ATACAGAAGA AGCGCTAAGG
CAGATGGAGC AACTGGCTTT AAGGTACTCA CCGCAGCAAA TAAACTGGAG ATTTGACCCT
ATTATTCTTA GTATTAAGGA AGAGAAAAAT CCGACACCAG ATAACTTTAC AAGAGCAAGG
CTGAAGGTGT TTGAGGCTTT ATGCAAGGAT ATTTCTTCCT TTGGAGTAAA TCGCTGTACC
ATAAGTTTTC TTTGCTTGTA TAAAAAAGTA GAACAAAGAA TGAAAGCATC GAAGTTTACT
TGTTCAATTC CTTCACAACA ACAGCAGATT GGATTTGTAA GCCAATTAGT GGAGATTGCA
GATAAATATG GGGTCACAAT TTATACATGC ACTAGCCCCA TTATTGAAGG AGTACCTGGA
GTGAGGAAGG GGCATTGTAT AGACGGGGCC TACCTTGAAG CATTGTTCGG TAAAAGAGCA
TCCCATGCAA AAGATGCAGG GCAAAGAAAA GAATGCGGAT GTACTAGGTC AAGAGATATT
GGAGCATATA GTGGGCAGAG TTGCGGGCAT GGATGTATTT ACTGCTATGC GAGATAA
|
|---|
| Protein sequence | MLEIISCSRR TDIPAFYYDW LQECLKNKYV MVKNPYNKQT YMLDLSPERV HSICLWSKSF
ANVLKNPGYL SQYNLYFQFT ITGYSKFLEP NVADTEEALR QMEQLALRYS PQQINWRFDP
IILSIKEEKN PTPDNFTRAR LKVFEALCKD ISSFGVNRCT ISFLCLYKKV EQRMKASKFT
CSIPSQQQQI GFVSQLVEIA DKYGVTIYTC TSPIIEGVPG VRKGHCIDGA YLEALFGKRA
SHAKDAGQRK ECGCTRSRDI GAYSGQSCGH GCIYCYAR
|
|---|
| |