| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1105 |
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| Symbol | |
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| ID | 4811403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 1314018 |
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| End bp | 1315232 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640106527 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001037530 |
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| Protein GI | 125973620 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0187302 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACTTT ACAGCTACAA GGTTAAAAAT GAGGCCGGCA AGTTGTTTAC CGGAGAGGCC
AAGGTGGACA GCGAGGAGGA ACTTCGGCGA CTGCTTCTGG ACAAGGGATA CACCCCGGTA
GAAATTGTTG AGAAAAATGT AATAAACGAT ATAAGTCAGA TTCGTTTGTT CAAGCCGAGA
GTAAAAGTAA AGGATTTGGC TGTATTCTGC AGGCAGTTTT CCATAGTGTT GGAAGCCGGA
GTACCTATAG CAAATGCATT GGACGTGTTG AGGGAACAGA CTACAAACAG AACTTTGAGA
GAGTGTCTTG ATGATGTTTA TGACAACATA CAAAAAGGTA TTGCCCTTTC CAACGCCATG
CGGCAGCATC CGAGAATTTT TCCGGAGATG CTGATTAACA TGGTTGAAGC TGGAGAAATA
AGCGGACAGC TGGATCTGGT TTTTAAGAGA ATGGCAATTC AGTTTGAAAA GGAAAACAAA
TTGAACCAGA AAATAAGAGG TGCACTTACA TATCCGATTA TAGTAACGGT TGTGGCAATA
GCCGTTATAA TGATATTGAT GGTGGCTGTT GTGCCGACGT TTGTCAAAGT TCTTGCGGAT
TTTGATGTTG AGATGCCCAT TTATACAAGA ATATTGATTG CGGTAAGCGG TTTCTTTAAA
TCTTTTTGGT TTATTATACT TGGCGCTTTG ATTGTTATTG GTGCGGGAAT AGCATATTTT
TCACGAACCT ATGAAGGAAA GATATTTTTT GGCACACTCG CTATCAAGCT TCCTGTGATA
AGAGGAGTTA CGAGGAATAT AATGACGGCA AGGCTTACAA GAACATTGGG AACGCTGATG
TCCAGCGGCG TCTTGTTGAT TCAGGCGATG GAAGTTGTCC AGAAAGTATT GGGAAATCAG
GTTATAAGGG AGAAAATTGA CGGTGTTATT GAGGAAATAA AAAAAGGAAG AGGTCTTACA
GCACCGCTTG CAGCATTGAA TTATTTTCCG CCGATGGTCA TTTCGATGAT CCGAATCGGA
GAAGAATCAG GTAATCTGGA TTTCGCTCTT GATAAATCGG CAGATTTTTA CGACGAGGAA
GTTGAGGCTT CCCTTGCAAT GCTGACAAGT TTTATTGAAC CTGCAATTAT AATTGTGTTG
GCTTTGGTTG TTGGTTTTAT AGTATTGAGT GTGTTGACAC CAATGTTCAC TATTTACAAC
GAAATGTCTT TTTAG
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| Protein sequence | MPLYSYKVKN EAGKLFTGEA KVDSEEELRR LLLDKGYTPV EIVEKNVIND ISQIRLFKPR
VKVKDLAVFC RQFSIVLEAG VPIANALDVL REQTTNRTLR ECLDDVYDNI QKGIALSNAM
RQHPRIFPEM LINMVEAGEI SGQLDLVFKR MAIQFEKENK LNQKIRGALT YPIIVTVVAI
AVIMILMVAV VPTFVKVLAD FDVEMPIYTR ILIAVSGFFK SFWFIILGAL IVIGAGIAYF
SRTYEGKIFF GTLAIKLPVI RGVTRNIMTA RLTRTLGTLM SSGVLLIQAM EVVQKVLGNQ
VIREKIDGVI EEIKKGRGLT APLAALNYFP PMVISMIRIG EESGNLDFAL DKSADFYDEE
VEASLAMLTS FIEPAIIIVL ALVVGFIVLS VLTPMFTIYN EMSF
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