Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0868 |
Symbol | |
ID | 4810486 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 1042845 |
End bp | 1043555 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640106284 |
Product | type IV pilus assembly PilZ |
Protein accession | YP_001037295 |
Protein GI | 125973385 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000129283 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAAGA TAAAATTACG GGATTTTCTT TCAGAAGGCG CTATAATCAG GACAAAGCAT TGCAATTCAA CCAACTGGGT GACCAACGTC GTTTATGCCA TTAATGAGGA CTGGATTGAG GTAGATATCG GCCTTGAAAA GGATTATATT GACAACATAA TTATGATTGG AGATACAATG AGATGCAAAT ACAGTACTGA TGAGTATGAG TTTATGTTAA TTGGCTGGGT AACAAAAATA AAGCTTGAAG AACCGCAGAG TATTACCATC AAGATTCATG ATGTCGAAAG ATTTGCAAAC AGACGTGACA ACTACAGATA CGATATATAT TTGTGCTCAG TCATAAAGGC AAACAGAAAT GACGAAAAAG GCGTGTTTGC CATCATGACT AATCTAAGCC AGGGCGGGGC TGCTTTTATT GCCAAGGAAG ATATCGAAAA AGAACTGGAA ACGGCTTATA ATATGCAGGA GGAGAAAAAT TATTATTTTG AAGTATTTAT TACTCCTAAA AAACAACTGT GTTTTACCGG TACCGTGAAA AGAAAAACGA GTAATGAAAA AGGATTTGAG TATGGTGTAA AAATTTTCGA TATTGATTTT CAAAATGAAA AAACTCTGAA CGAGTTGTTG GATGAGCTTG AAAAAAAAGA TAAAGAGTTC TATAATAAAC GAAGTAGCTT TTGGTCGAAG AATAGCAAAT ATAATAAATA A
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Protein sequence | MSKIKLRDFL SEGAIIRTKH CNSTNWVTNV VYAINEDWIE VDIGLEKDYI DNIIMIGDTM RCKYSTDEYE FMLIGWVTKI KLEEPQSITI KIHDVERFAN RRDNYRYDIY LCSVIKANRN DEKGVFAIMT NLSQGGAAFI AKEDIEKELE TAYNMQEEKN YYFEVFITPK KQLCFTGTVK RKTSNEKGFE YGVKIFDIDF QNEKTLNELL DELEKKDKEF YNKRSSFWSK NSKYNK
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