| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0847 |
|---|
| Symbol | |
|---|
| ID | 4810465 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | - |
|---|
| Start bp | 1023176 |
|---|
| End bp | 1023733 |
|---|
| Gene Length | 558 bp |
|---|
| Protein Length | 185 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640106264 |
|---|
| Product | elongation factor P |
|---|
| Protein accession | YP_001037275 |
|---|
| Protein GI | 125973365 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) |
|---|
| TIGRFAM ID | [TIGR00038] translation elongation factor P |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0000000412318 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTTCAG CTGGTGATTT TAAAAATGGA GTGACTTTTG AGCTCGATGG GCAGATATTT
CAGGTTATTG AGTTCCAGCA CGTCAAACCG GGTAAGGGAG CTGCTTTTGT AAGGACTAAA
CTGAAAAATA TAGTAACAGG TGCTACTATA GAGAAAACTT TTAACCCGAC GGACAAGATG
CCAAAGGCCC ATATCGAAAG AAAGGACATG CAGTATTTGT ATAATGACGG CGACCTGTAT
TATTTCATGG ATACAGAAAC CTTTGAGCAG CTGCCTTTGG GCAAAGACAA AATCGGTGAT
GCTCTCAAGT TTGTAAAAGA AAATGAGATA GTAAAAGTTC TTTCCCACAA AGGGAATGTT
TTCGGAATAG AGCCTCCTAA CTTTGTTGAA CTTGAAGTAA CCGATACAGA ACCCGGTTTT
AAAGGTGATA CGGCCACCGG TGCGACCAAG CCTGCCATTG TCGAGACAGG AGCGTCCATT
AAGGTTCCAT TGTTTGTCAA CAAGGGAGAT ATTATTAGAA TTGATACCAG AACAGGAGAG
TATATGGAAA GAGTATAA
|
|---|
| Protein sequence | MISAGDFKNG VTFELDGQIF QVIEFQHVKP GKGAAFVRTK LKNIVTGATI EKTFNPTDKM
PKAHIERKDM QYLYNDGDLY YFMDTETFEQ LPLGKDKIGD ALKFVKENEI VKVLSHKGNV
FGIEPPNFVE LEVTDTEPGF KGDTATGATK PAIVETGASI KVPLFVNKGD IIRIDTRTGE
YMERV
|
|---|
| |