Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0819 |
Symbol | |
ID | 4810437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 993793 |
End bp | 994656 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640106236 |
Product | ABC transporter related protein |
Protein accession | YP_001037247 |
Protein GI | 125973337 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.989778 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGATTGA AAATAGAGGG CCTGTCAAAA AGCTACAAAA AGAAAAAAGC TCTTGATTCT GTCAACTTGT TTATTTCAAA CGGAATCTAC GGTCTTTTGG GACCCAACGG TGCCGGAAAG ACAACTCTGA TGAGGATTCT TGCCGGGCTT ATAGCGCCGG ATGAAGGGAG AATTGAATTT GACGGGGAAG ATGTGCTGAA AAATATGGAC AAATTTCGCT ACAAGATAGG CTATTTACCT CAGGAATTCG GGTGCTACAA GAGTATAACG GTTGAAGAGT GCCTGGATAC GATAGGTGTT TTAAAGGGAA TAAGGGCTCC GGAGCGGAAA AAGCAAATAG AACAGGTTCT TGCTGAGGTT AATTTGAGTA ATGAGGCAAA GAAAAAAGTC GGAGCCCTGT CGGGAGGAAT GAGAAGAAGG CTGGGAATTG CACAGGCTAT GCTGGGCAAT CCTGCATTTA TTATGGTTGA TGAACCTACA GCTGGTCTGG ACCCTGAGGA GCGTATAAGG TTCAGAGGAT TTATAAGAAG AGTTGCCGCA AACAGGGTTG TATTGCTGTC CACTCATATT ATTGAAGACA TTAAAAACAA TTGCGATGGA CTGGCATTAA TAAATAACGG CAAGGTTAAG CAGTTTGACG GTTTTGAAGA ATTGGAAAAC ATGGCAAAAG GGAAAGTATG GAAAATGGTT ATAAACAGTA ATGATTTTTA TAAAATAGAG GGCAAGTACA AGATACTTTC AACAAACACC AATGCGGATA ATAATTTGGA AATTCGGGTT TATTCCGAAG AAAAACCGTC GGAAGATGCG GAGGCGGTTC AACCAACGGT GGAGGAAGGT TATTTGACAT GGATAAACGC GTAA
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Protein sequence | MRLKIEGLSK SYKKKKALDS VNLFISNGIY GLLGPNGAGK TTLMRILAGL IAPDEGRIEF DGEDVLKNMD KFRYKIGYLP QEFGCYKSIT VEECLDTIGV LKGIRAPERK KQIEQVLAEV NLSNEAKKKV GALSGGMRRR LGIAQAMLGN PAFIMVDEPT AGLDPEERIR FRGFIRRVAA NRVVLLSTHI IEDIKNNCDG LALINNGKVK QFDGFEELEN MAKGKVWKMV INSNDFYKIE GKYKILSTNT NADNNLEIRV YSEEKPSEDA EAVQPTVEEG YLTWINA
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