| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0817 |
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| Symbol | |
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| ID | 4810435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 987181 |
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| End bp | 992661 |
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| Gene Length | 5481 bp |
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| Protein Length | 1826 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640106234 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001037245 |
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| Protein GI | 125973335 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATCA TTAACAACAG ATACAAGGTA ATTACAACTA TCAAGGAAGA CTTGTCAAAC
ACATTATACC TTGTTTCAGA TATGATAAAT GACAACAAAA AAATGGCTTT TAAAATCATC
AATCCGGAAC TTATATCTCC AAAAAACTTA GAACAGCTAA AGAAGGAATT TGTAACTCTT
TCTTCACTGT CCCATCCCAA TCTTATGCAA ATTTACGGGT TTGGAACAAT AAATTCCATT
GACGGGAGCC TGACTTCATC CAAACAATTT TATTGCACCT ATGAATATAT AAAAGGTAAA
AATATAATCA GCGCCGTCTC AGGCACGAGT TTTGAAAAGA AAATTGACAT TATTCTCCAA
ATATGCAATG CACTTTATTA TTTGCACAGA AGAGGATTTT TCCTCAAAAA TCTTGACCAT
AAAAGTGTTG TTGTAACCGA AACAGACGGC AATCTTTGCG TAAAACTGAT TGGAATGCCG
GGAAATGAAG AAATGGAAAA AGTAGTTTTT CGTTTAAAGA AAATATCCAA TCAGTTTAAA
TTTCCGGAAG ATTTAAAATC CTCAAATAAT AACAGCAATC TTGCTGATCT CTATTCACTG
GGCGTTTTAA TCTTCTATAT TCTGACGGGT AAAAATCCTA ACAGATGTAA TTTCTTGAAT
ATTTGGGAAC AATGCAAAAA CAATCCTTCC GTCTTAAAAT CGGTACCGGA CAACATAGAC
AAAAAAAGGT TGCTGGGAAT TATTTCTAAA CTTACATTAA CAAATCCTGA AAATCATTAC
AAGAGTGCAT ACTCTGTAAT TAAAGATATT GAAAAAGTAT GCGGTATAAA AGAAACCCGT
TTTCAGAAAA AATGGTTTGA AAAAATTATA ACCAAAACCA AGCTGATAGG AAGAGAAGAA
AACATAAACC GTTTGAATTC ATGGATAAAC GATATTTCAA ACAATAACTG CAGTCAAAAA
ATAACTTGTA TAACCGGTGA AGCCGGTATT GGAAAAACAA GGCTTTTAGG TGAACTTATG
TTCTCGCTGA GTCTTGAAAA AACAAGGGTA TTGCATGGGG TGTCCTCTGA AAACGCGGAA
AACACTTATG AACCGATAAA ACAAATACTG GAGCAGTTAA TCCCTTATGC ACCGGCCGAA
ATATTGGAAA GTTTCAAATC CGAGCTGGTA AAAATTTTGC CCGACGAAAA AAGTTTAAAA
GGAGCGGTTC CGAGTCCGGC TCTGCCTGAT GAAAAGGAAA AACTAAGGCT TAAGGTGAGA
GTTGGAAATT TCATAGCCAA TGTTTTGGAG AAAGAACTGT CTGTTTTGAT ATTTGACAAT
GCTCAATGGA TGGATGAAGC ATCTTTAGAG CTTATCGACT ATCTTGCCGG CTCAAAAAAG
ATTCCTCTTT GCATAATTCT GTCCTACCGG AAAGAGTCCA TGAACAAAAA CAAGTCAGGA
CAAAAATACA TCGAAAAATG GCTGAGCTCA TCCATTGCCA ACGAGATAAC CTTAAGTCGT
TTTGACTTTG AAGAAACTTG TGAATTTATA AAAAATGTTC TTGCAATAAC AACCTCCCCT
GCCGCTTTCT GTACGGAAAT GTTCCGTTAC ACCGAAGGAA ACCCGGGGTT TATAATAGAC
GCTATTACGG CATTGTTCAA GGAAGGAAAG CTGTACATTG ATGACAGCGG GCAGTGGAGC
ACTGATTTTG ATGAAGATGC GGACTATTCC AGGCTCTATA TACCCCCAAG CATGCACGAA
GCTGTGTGGA AGCATATCAA TACTTTGGAT AAGATTTCGT ATGAAACTTT GGAAACAATT
TCTGCTTTTA ACATGCCTGT CTCTCTTGAG ATAATCGAGT CAATATTGGA AGCCTCTCAT
AATGAGATAA AAGACATACT GGCAGAACTT ATTTCCCACC AGATAATAGA ACAGAGGCTT
GCCGACTGGG GTTACACTTA TGATTATCAC TCAAAAAAAA TTAAAAATGA AATCTACAAG
AAAATTGAAC CTTCCAGAAA AAAAGCACTT CACAAAAAGT GCGCCAAAAT TTTGGAGGAA
ATGTATAAAG ACGACAACAG AATAAACAAG GATGAGCTTA TTTATCACTA TATAAAAACC
GGCGAAAAGC AAAAGGCACT GAACATCATT ATAGAATCCG CCGACAGAAT GTTAAAGCTC
CACATCAATG CCCAGACCAT GGTTTATCTC AAAAGAGGAC GTCAGATAGC AAAAGAAATT
TCTTCTGTAA AAGATACCAT AAAAATCCTT TTAATGATGG GTGAACTCTA CCGCAAAAAA
GGAGAAAACC GTAAAGCCTT TGAATGCTAC AATGAAGCTT TGAAATATGC CAGGGAACTT
AATGACAAAG CAACAATTGC GAAAGTCAAG GAAATGATCG GAGCCCTGTA CACAAGAAAA
AATGATTTTG ACCGGGCACT GCTTTTCCTC AATGACTCTT TGTCACTGTC CAAAGAAATA
GGATATGTGG AAGGCTATCT TGAAGCCGTC CGCCGTATAT GCTGGGTATA TATATTCAAA
GGAAAAAACA AAGAAGCAAT AGACATGATT AACAATGTTC TTTCAGAGTA CAGTGATGAA
AAATACTCCC TCTATCATGC CTCGCTTTAC AACGTTCTTG GTACCCACTA TCTGGAGCAG
TCAAATATAG ACGAGGCTTT GAGATGCTAC AATAAAAGTA TAGAGCTTTA TGAAAAAAAC
AATGAAAAAG TTGAAATAGC TTATCCCTTA AACAATATTG CCACTGTATT TGCCGAATTC
TTAAATGATA ATGCAAAAGC CCGGGAATAT TTTGAAAAAT CCCTTCAGAT AAACCTTGCA
AACAACATGG TTGAAGGGAT ATCCAGCTGT TACGACAACC TCGGCGAAAC CTACCGGCTG
GAAGACAATT ACACCCAGGC TCTGGAATAT TATTTTAAGT GTGAAGAGCA GGCAAGGGAA
TGCGAGCTCA ATTCCCTTTT GTTCACGGTA TATAAAAATA TCATGCTTGC TTATCTGGAA
CTTTGCGAAT ACCAAAAATC CTATGAATAT CTGCAAAAAG TAAAACAGGA AATGGAAAAA
AATTCAGACC GCGGGCATGA CGTTCAGATT TTCTATGAAT ATGCAGCAAA ATATTACTTT
GAAATAGGGT GTTTTGAAGA AGCAAAAAAC ATGGCTCAAA AAGGAATAAA CACATGCAAA
AAGTTATCCA CCAGTGAAAG CCTGACTTTA AATTGCATTA TACTTCTTTC GGAATACTAT
GTCTCAAACC AAAAAGATTC AGAGCTTCTT TTCGAGGATG CTCTTACTCT GCTGAAAAGG
CATAAACAAA GCTCAACTGT AAAAGAACAA AGAGACATGA TTCATTTGCT TGCCGAAGCA
CTTATTGCTT CCGGCAACAC GGAAGCTTCC CTAAGCCTTT TGGAAAAAAG CCTGGAGCTT
AGCGCAACCG TAAATACAAA AAAGCTGGAA ATAGAATACC TTATACTTTA CGGTGCCAGC
ATAGGCGGGA ACTGCGGAAT AGAAACCATT AACAGCGGAC TAAAGTTAAA CGCTGAGTAC
AAAAGCCTAC GTTTAAAATG GAAAGGCTAT AAAACAATTG GCGATATTTA TTATTCCATG
AAGGAAAAAA GTTTGGCCGG CATAAACTAT ATAAAGGCCT TGGACGCACT GTATCATCTT
GTACAAAAAG TTCCTGTTGA ATTTCACGGT TGCTTTTTGT ATTCTCACAA CCGCGAGGAG
TCCAGGTTCA GGCTCCTTTC ACTCAAGGCT GACGAGCTGA AAGAACAAGA ATTGTCAATC
GAAAAGCACA TAAACAATAA AATCAACAGT GGTAAAAACA TCGTCCAACA TTTCTTTGAA
GGAATAAATC ATGAATTCGT ACTCAAAGGG GCCGAAAGCG CTATGGCGTT GGACAGCGCT
CAAAGCCATG CTTCAAAAGC AATCGAAGAA AAGCTTGGGA TGATAGAAAG CTTGTTTATG
AAGTTTACGC CGGATTATTT AAGCAACCTC AAGATGATCC TTGAAACCGC ATGCGACCTG
ACATCGGCAG AGACAGGATA TATACTGCGT TACAACGATA AAAACGAACT GGATGCCTTT
GTTGCTTATG ATAGCAACAC TGAAGCCAAT TATTACAGTT ACATAATCGA ACGTACCAAT
GAAAATATTG AAGGAATATT TGCAGCTCAA AGTTTTGACA AAAAAGCAGG AAATATTGAT
ATTTTCCTTC CCGGAAACAT CAAAGCCGTT ATATGTATTC CCATATACAG CCATGAATCC
GGGGACAGAT ATTCGTCTGT AAAACCGTCA AAAAGAAAAC GCCGGGAATC AAACGATTAC
AATATTAAAG GATATATTTA TCTTTCAACC AAAAACGTAT TCAACAGATT CTCATGGCAA
ACCTTCGGCA TGGTTAAGCT TCTTTCAAAA ATTGCGGCAC TGCAAATAGA AAATTACGAC
CTTAAAATAA TTTCAACCAC CGACAAATTG ACCGGAACAT ATACAAGAAA ATTCTTCGAA
AATGCCATTG AAACACAACT TAAAAAGGCA AGCAGGGAAA AAAGCCAGAT GTCAATAATT
ATGATTGATA TCGACAAGTT TAAGAGCATA AATGACAACT ATGGTCATCA AAAGGGAGAC
GAGATTCTCT CAAAAGTCGG AAATATTCTG CTTAAGAATA TCAGACCGAC AGATATTTGC
TGCAGATACG GAGGCGAGGA ATTTGTAATA ATACTTCCGG ATACAGGACC CTCCGAGGCC
GAAGCCCTGG CTGAAAGGCT TAGAAGCACG GTGGAAAAAG CCCGCTTGAT GGGACAAGGA
AACAGTCTTA CCATAAGTCT TGGTATATCC TGCTATCCGA AACACGGCAG CATACGCAAT
GAACTCATTG AAAAAGCCGA CCAGGCCCTT TATCATGCAA AAGAATCGGG CCGAAACCGT
TACTCTCTCT GGAATACAAA AATGAAAAAG CTGTCTAAAA GAATGGACAA ACTTGCCGGC
ATTATATCCG GCAATGTAAC CCACGATCAA AGAAATGTTC TGGCATTGCT GGAAATCGTC
AGACTCTCCA ACGAAACAAT GCTTTTTGAT GATAAAATAT ACCGAGTGCT TGGAACAATA
ATAGACACTT TCGATGCGGA ATACGGAGTT TTAATTGTCT GCCAGGAGCA AAATCCAAAA
ACTTTAAAGG TCTATGCAAG AAAAAGTACA GTACCGGGAT GGGTTGAGGA AGAATGCTAC
AACAAAAAAA TCGTAGACAA AGTACTGAAA CAAAAAGCAG GAGCTTACAT GGTGGACTGG
GACAATGCCA ACGTAATTGA TTTGCAAACC GGCGAAACCG TACTCAATTC AATATTGGTT
GAACCCATAT TAAGAGGAAA GGAAGTAAAA GGCGTCCTCT ACCTCTCCCG CCCCATCAAC
CGGAAAGAAT ACGGCTTTAA TGAATTGAAC TTCCTCAGTG CTTTGGGAAA CGTTATATCC
GGTATATTAT CAATGCCGTA A
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| Protein sequence | MNIINNRYKV ITTIKEDLSN TLYLVSDMIN DNKKMAFKII NPELISPKNL EQLKKEFVTL
SSLSHPNLMQ IYGFGTINSI DGSLTSSKQF YCTYEYIKGK NIISAVSGTS FEKKIDIILQ
ICNALYYLHR RGFFLKNLDH KSVVVTETDG NLCVKLIGMP GNEEMEKVVF RLKKISNQFK
FPEDLKSSNN NSNLADLYSL GVLIFYILTG KNPNRCNFLN IWEQCKNNPS VLKSVPDNID
KKRLLGIISK LTLTNPENHY KSAYSVIKDI EKVCGIKETR FQKKWFEKII TKTKLIGREE
NINRLNSWIN DISNNNCSQK ITCITGEAGI GKTRLLGELM FSLSLEKTRV LHGVSSENAE
NTYEPIKQIL EQLIPYAPAE ILESFKSELV KILPDEKSLK GAVPSPALPD EKEKLRLKVR
VGNFIANVLE KELSVLIFDN AQWMDEASLE LIDYLAGSKK IPLCIILSYR KESMNKNKSG
QKYIEKWLSS SIANEITLSR FDFEETCEFI KNVLAITTSP AAFCTEMFRY TEGNPGFIID
AITALFKEGK LYIDDSGQWS TDFDEDADYS RLYIPPSMHE AVWKHINTLD KISYETLETI
SAFNMPVSLE IIESILEASH NEIKDILAEL ISHQIIEQRL ADWGYTYDYH SKKIKNEIYK
KIEPSRKKAL HKKCAKILEE MYKDDNRINK DELIYHYIKT GEKQKALNII IESADRMLKL
HINAQTMVYL KRGRQIAKEI SSVKDTIKIL LMMGELYRKK GENRKAFECY NEALKYAREL
NDKATIAKVK EMIGALYTRK NDFDRALLFL NDSLSLSKEI GYVEGYLEAV RRICWVYIFK
GKNKEAIDMI NNVLSEYSDE KYSLYHASLY NVLGTHYLEQ SNIDEALRCY NKSIELYEKN
NEKVEIAYPL NNIATVFAEF LNDNAKAREY FEKSLQINLA NNMVEGISSC YDNLGETYRL
EDNYTQALEY YFKCEEQARE CELNSLLFTV YKNIMLAYLE LCEYQKSYEY LQKVKQEMEK
NSDRGHDVQI FYEYAAKYYF EIGCFEEAKN MAQKGINTCK KLSTSESLTL NCIILLSEYY
VSNQKDSELL FEDALTLLKR HKQSSTVKEQ RDMIHLLAEA LIASGNTEAS LSLLEKSLEL
SATVNTKKLE IEYLILYGAS IGGNCGIETI NSGLKLNAEY KSLRLKWKGY KTIGDIYYSM
KEKSLAGINY IKALDALYHL VQKVPVEFHG CFLYSHNREE SRFRLLSLKA DELKEQELSI
EKHINNKINS GKNIVQHFFE GINHEFVLKG AESAMALDSA QSHASKAIEE KLGMIESLFM
KFTPDYLSNL KMILETACDL TSAETGYILR YNDKNELDAF VAYDSNTEAN YYSYIIERTN
ENIEGIFAAQ SFDKKAGNID IFLPGNIKAV ICIPIYSHES GDRYSSVKPS KRKRRESNDY
NIKGYIYLST KNVFNRFSWQ TFGMVKLLSK IAALQIENYD LKIISTTDKL TGTYTRKFFE
NAIETQLKKA SREKSQMSII MIDIDKFKSI NDNYGHQKGD EILSKVGNIL LKNIRPTDIC
CRYGGEEFVI ILPDTGPSEA EALAERLRST VEKARLMGQG NSLTISLGIS CYPKHGSIRN
ELIEKADQAL YHAKESGRNR YSLWNTKMKK LSKRMDKLAG IISGNVTHDQ RNVLALLEIV
RLSNETMLFD DKIYRVLGTI IDTFDAEYGV LIVCQEQNPK TLKVYARKST VPGWVEEECY
NKKIVDKVLK QKAGAYMVDW DNANVIDLQT GETVLNSILV EPILRGKEVK GVLYLSRPIN
RKEYGFNELN FLSALGNVIS GILSMP
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