Gene Cthe_0767 details

Gene Information

• Locus tag: Cthe_0767
• Symbol: rimM
• ID: 4810385
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium thermocellum ATCC 27405
• Kingdom: Bacteria
• Replicon accession: NC_009012
• Strand: -
• Start bp: 931229
• End bp: 931753
• Gene Length: 525 bp
• Protein Length: 174 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 640106184
• Product: 16S rRNA-processing protein RimM
• Protein accession: YP_001037195
• Protein GI: 125973285
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0806] RimM protein, required for 16S rRNA processing
• TIGRFAM ID: [TIGR02273] 16S rRNA processing protein RimM

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.000000495507
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATACAAT ATTTGCAAGT AGGAAAAATA GTAAATACTC ATGGTATAAA GGGAGAGGTC 
AAAGCTATTC CGCTTACTGA CAATCCCCGT AGATTTAACA AACTTAAGTG GGCCTATGTG 
TCCAAAGAAA TATCCAATGA AATGCCAAAA TTTGATATTG TATCTGTAAA ACATCACAAG 
AACTTTGTAA TTTTAAAGTT CAGTGGAATA GATGATATGA ATGCTGCCGA AAAACTTAAA 
GAACATTTTG TAATTATTGA CAGAAAAGAT GCTGTAAAGC TTCCAAAGGA CACATTTTTT 
ATTTGTGACC TCATTGGTAT GAATGTGTTT GACACAGAAG AAAAGAAATT AGGGGTACTT 
ACCGATGTGC TGAGTACCGG AAGCAATGAT GTGTATGTGG TAAAAAGTGA TAATAATAAG 
GAAATTTTAA TACCTGCACT AAAGTCTGTG GTAAAGAAAG TTTGTTTTGA AGACAATAAA 
ATGGTGGTAG ATTTGCCTCA AGGATTGATT GATGATGAGG TTTGA 

 

Protein sequence

MIQYLQVGKI VNTHGIKGEV KAIPLTDNPR RFNKLKWAYV SKEISNEMPK FDIVSVKHHK 
NFVILKFSGI DDMNAAEKLK EHFVIIDRKD AVKLPKDTFF ICDLIGMNVF DTEEKKLGVL 
TDVLSTGSND VYVVKSDNNK EILIPALKSV VKKVCFEDNK MVVDLPQGLI DDEV