Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0719 |
Symbol | |
ID | 4810337 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 874096 |
End bp | 874527 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640106136 |
Product | BadM/Rrf2 family transcriptional regulator |
Protein accession | YP_001037147 |
Protein GI | 125973237 |
COG category | [K] Transcription |
COG ID | [COG1959] Predicted transcriptional regulator |
TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0000523514 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGGTTAT CTACCAAAGG AAGGTATGGG TTAAAAGCCA TGCTTGATCT TGCCCTCCAC AACGGCGAGG GACCGGTTGC TTTAAAAAGT ATTGCCGAGC GCCAGAATTT GCCGGAAAAT TATTTGGAGC AACTTTTTGC AACTCTTAAA AAGGCTGGCC ATATTACAAG TGTTAGGGGT GCACAGGGAG GCTATTTGCT TTCCAAAGAC CCTGACAGTA TTACAATAGG CTCGATTTTA AGGTCACTGG AGGGTTCTCT CGCACCGGTT GATTGTGTTG TGGAAGACAG TTCTCCAAAA TGTGACCGTT TTGACAACTG TGTTACGAAA ATAGTGTGGG AAAAAATAAG AGACAGCGTC AATGAAGCTG TAGATTCCAT TACTTTGGGG GATCTCGTAA AAGAATCCAA CAAAAATTCC GCACTTTCTT AA
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Protein sequence | MWLSTKGRYG LKAMLDLALH NGEGPVALKS IAERQNLPEN YLEQLFATLK KAGHITSVRG AQGGYLLSKD PDSITIGSIL RSLEGSLAPV DCVVEDSSPK CDRFDNCVTK IVWEKIRDSV NEAVDSITLG DLVKESNKNS ALS
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