Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0701 |
Symbol | |
ID | 4810319 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 859667 |
End bp | 861064 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640106118 |
Product | oxaloacetate decarboxylase |
Protein accession | YP_001037129 |
Protein GI | 125973219 |
COG category | [C] Energy production and conversion |
COG ID | [COG5016] Pyruvate/oxaloacetate carboxyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTAAGG TAAAAATTAC CGAAACGGCG CTGAGGGATG CCCATCAATC TCTCATTGCA ACAAGAATGA GAATAGAAGA GATGCTTCCT ATCATAGATA AACTGGACGA GATCGGTTAT CATTCTTTGG AGGTATGGGG CGGTGCAACC TTTGATGCCT GCCTGAGATT TTTGAATGAA GACCCGTGGG AAAGGCTTAG AATTATAAAA AGCCACTGCA AGAAAACTCC CCTTCAAATG CTTTTAAGAG GCCAGAATCT TTTGGGTTAC AAGCATTATG CCGATGACGT TGTGGAGTAC TTTGTACAAA AGAGCGTTGC AAACGGTATA AACATAATAA GAATTTTCGA CGCCTTGAAT GACACCAGAA ATATAGAAAC TGCAATCAAA GCCTGCAAAA AAGAAGGCGG TCATGCTCAG GGAACGGTAT GTTATACAAT AAGTCCCGTT CACAATCTTG AACTTTTTGT CAAAGATGCA AAGACTCTTG TGGAAATGGG AGCTGACTCC ATATGCGTAA AGGATATGGC AGGACTTCTG CTTCCATATG TTGCATATGA CCTTATCAAA GCATTAAAAG AAAACGTAAA AGTGCCGATT CAACTTCATA CCCACTATAC GAGCGGTGTT GCTTCAATGA CATATCTGAA GGCAATTGAG GCAGGGTGCG ATGTTGTGGA CTGCGCTATC TCACCAATGT CAATGGGAAC ATCCCAGCCT CCGACAGAAC CTCTTGTGGC AACCTTAAAA GGCACGCCGT ACGATACCGG ACTTGACCTG GATAAATTAA GTGAAATCGC AGACTACTTC AGACCTCTCA AAGAAAAGTA TATTTCAGAA GGACTTCTTG ATGTAAAGGT TATGGGAGTT GACGTAAACA CTCTCAAATA CCAGGTACCC GGTGGAATGC TTTCAAACCT GGTGTCTCAG TTAAAGCAGT CCAATGCGGT TGATAAATTC GAAGAGGTTC TGAAAGAAGT GCCAAGAGTA AGAGAAGACT TCGGATATCC TCCGTTGGTT ACACCTACAA GCCAGATTGT AGGTACTCAG GCAGTTTTAA ATGTGGTAAC GGGTGAAAGA TACAAAATGG TTCCAAAAGA ATCCAAGGCA CTGATCAAGG GTGAATACGG CAGAACACCG GCTCCGGTCA ACCCTGAAGT TCAGAAGAAG ATTTTAAAAG ATGAAGAGCC GATTACAGTT AGACCTGCTG ATTTGATAGA GCCCGAGCTT GACAAGATCA GAAATGAAAT GAAAGAATAC CTGGAACAAG ACGAGGACGT TTTGTCCTAT GCACTGTTCC CGCAGGTGGC AGAGAAGTTC TTCCAATACA GGAAAGCTCA AAAATATAAG ATAGAACCGG ACATGGTCGA TTACGAAAAC AGGGTTCATC CGGTTTAA
|
Protein sequence | MAKVKITETA LRDAHQSLIA TRMRIEEMLP IIDKLDEIGY HSLEVWGGAT FDACLRFLNE DPWERLRIIK SHCKKTPLQM LLRGQNLLGY KHYADDVVEY FVQKSVANGI NIIRIFDALN DTRNIETAIK ACKKEGGHAQ GTVCYTISPV HNLELFVKDA KTLVEMGADS ICVKDMAGLL LPYVAYDLIK ALKENVKVPI QLHTHYTSGV ASMTYLKAIE AGCDVVDCAI SPMSMGTSQP PTEPLVATLK GTPYDTGLDL DKLSEIADYF RPLKEKYISE GLLDVKVMGV DVNTLKYQVP GGMLSNLVSQ LKQSNAVDKF EEVLKEVPRV REDFGYPPLV TPTSQIVGTQ AVLNVVTGER YKMVPKESKA LIKGEYGRTP APVNPEVQKK ILKDEEPITV RPADLIEPEL DKIRNEMKEY LEQDEDVLSY ALFPQVAEKF FQYRKAQKYK IEPDMVDYEN RVHPV
|
| |