Gene Cthe_0618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0618 
Symbol 
ID4808220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp758314 
End bp760479 
Gene Length2166 bp 
Protein Length721 aa 
Translation table11 
GC content43% 
IMG OID640106032 
Productferrous iron transport protein B 
Protein accessionYP_001037046 
Protein GI125973136 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0370] Fe2+ transport system protein B 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00437] ferrous iron transporter FeoB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0536695 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGATAA GAATTGCTCT TGCCGGCAAT CCAAACTCCG GCAAGACCAC AATGTTTAAT 
GATTTAACCG GAAGCAACCA GTATGTTGGC AATTGGCCCG GTGTTACAGT TGAAAAAAAG
GAAGGGAGAC TTAAAGGGCA CAAGGATGTT ATTTTAACCG ACCTGCCAGG TATTTACTCT
CTCTCCCCTT ATACACCGGA GGAAATTGTT TCGAGAAACT ATTTGATAAA TGAAAAGCCT
GATGCAATAA TAGATATTGT CGACGGAGCA AATATTGAAA GAAATTTATA TCTTACGACA
CAGCTTACTG AAATGGGCAT ACCTGTTGTT ATTGCACTTA ATATGATTGA TATTGTGCGC
AAGAAAGGCG ACAACATAGA TATTAAAAAG CTTTCTGAAA AGTTCGGCTG TGAAGTGGTT
GAAACCTCAG CCTTAAAAGG TACCGGTTCA AAAGAAGCTG TATCAAAAGC AATCGCTCTC
GCAAAGCAAA AAGCAAAGAT GACACCCAGG CATAAATTTT CCAAACCGGT CGAAGACTCG
TTGACAGAGA TTTCTTCCTG TATTAAAGAT CGTGTCAGTC CGGACCTTCT GCGCTGGTAC
AGCATCAAAC TTTTTGAGCG GGATCAAAAA GTACTGGAAG AGCTGTCTTT GGACGACGCC
ACCAAAGCCA GAATTGAAAA CATTATTGCC AAATGCGAAA AACAGCTTGA TGACGACAGC
GAAAGCATTA TTACCAATGA AAGATATAAA TATATCGTTG ACGCAATAAA AGACTGCTAT
GTGCGGAAAA ACACCTCCCG CGACACAATA TCTGATAAAA TAGACAAAGT TGTCACAAAC
CGGTGGCTGG CGTTTCCCAT TTTTGCCGCC GTCATATTCC TTGTCTATTT TATATCAGTT
ACCACTGTAG GAGGATGGGC AACCGAATGG GTAAATGATG TGTTGTTTGG TGAAATCATT
CCGACTGCCG TGGAAAGCTT CTTAGAATCA GTCAACTGTG CTGACTGGCT GTCATCTTTA
ATTGTTGACG GTATAATCGC CGGTGTTGGA TCCGTACTTG GTTTTCTGCC TCAAATGATA
GTACTGTTTT TGTGCCTTTC ACTCCTTGAA GATTGCGGAT ACATGGCGCG AATTGCCTTT
ATCATGGACA GAATATTTAG AAAATTCGGC CTTTCCGGTA AATCCTTCAT TCCGATTATC
ATAGGAACGG GATGCGGTGT TCCGGGCATA ATGGCTTCAC GAACTATCGA AAGCGAAGAA
GACAGAAAAC TGACCATCAT GACCACAACA TTTATTCCCT GCTCGGCGAA GCTGCCGATT
ATTTCACTCA TAGCGGGAGC ATTTTTCCCC GGGTCCGTTT GGGTAGCTCC TTCTGTTTAT
TTCATCGGCA TCGCCGCAAT TATTTGTTCG GGAATAATCT TAAAGAAAAC CAAAGCATTG
TCAGGAAACC CCTCCCCTTT CGTTATGGAG CTTCCTGCCT ACCATGTACC GGGAGTTAAG
AACGTGGCGC TTAATATTTG GGACAAAACC AAATCCTTCA TCAAAAAAGC GGGAACAATT
ATATTCCTTG CCAGCACACT TGTATGGTTC CTGTCCAACT TTAACTGGCG GCTTCAAATG
GTGGATGCGT CAGATTCAAT GCTTGCCGGC CTGGGAAACA TTGTCGCTCC GCTCTTCATT
CCTCTGGGCT GGGGAACTTG GGAAGCAGCT GTTGCAACGC TCACAGGCCT TGCAGCAAAG
GAAAATGTCG TAGGAACTTT CGGAGTTCTT TACGGATTTC ATGAAGTTGC CGAAGACGGT
GCAGAAATCT GGGGTAACCT TCAAGCCTCA TTTACGGCAC TTTCAGCATA TTCACTGCTG
GTTTTCAACC TGCTTTGCGC ACCATGCTTT GCCGCCATCG GAGCCATAAG AAGAGAAATG
AAGAATGCAA AGTGGACCCT TATAGCGGTA GGCTATCAAA CAGGTTTGGC ATATGCGGTT
TCTCTTTGCA TATATCAGTT CGGTATGCTG TTTACAGGTC ATGGATTTAA TATATTCACT
GCTGTTGCAA TAGTAGTTTT TGCAGGATTT GTTTATCTGC TTCTTCGCCG ACCGGATAAT
AAAGACAGTA AAAATTCTTC TACGAAAAAA ATATCAAGAG CATTGTTGGG AGGAGCAAAA
TTATGA
 
Protein sequence
MSIRIALAGN PNSGKTTMFN DLTGSNQYVG NWPGVTVEKK EGRLKGHKDV ILTDLPGIYS 
LSPYTPEEIV SRNYLINEKP DAIIDIVDGA NIERNLYLTT QLTEMGIPVV IALNMIDIVR
KKGDNIDIKK LSEKFGCEVV ETSALKGTGS KEAVSKAIAL AKQKAKMTPR HKFSKPVEDS
LTEISSCIKD RVSPDLLRWY SIKLFERDQK VLEELSLDDA TKARIENIIA KCEKQLDDDS
ESIITNERYK YIVDAIKDCY VRKNTSRDTI SDKIDKVVTN RWLAFPIFAA VIFLVYFISV
TTVGGWATEW VNDVLFGEII PTAVESFLES VNCADWLSSL IVDGIIAGVG SVLGFLPQMI
VLFLCLSLLE DCGYMARIAF IMDRIFRKFG LSGKSFIPII IGTGCGVPGI MASRTIESEE
DRKLTIMTTT FIPCSAKLPI ISLIAGAFFP GSVWVAPSVY FIGIAAIICS GIILKKTKAL
SGNPSPFVME LPAYHVPGVK NVALNIWDKT KSFIKKAGTI IFLASTLVWF LSNFNWRLQM
VDASDSMLAG LGNIVAPLFI PLGWGTWEAA VATLTGLAAK ENVVGTFGVL YGFHEVAEDG
AEIWGNLQAS FTALSAYSLL VFNLLCAPCF AAIGAIRREM KNAKWTLIAV GYQTGLAYAV
SLCIYQFGML FTGHGFNIFT AVAIVVFAGF VYLLLRRPDN KDSKNSSTKK ISRALLGGAK
L