Gene Cthe_0605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0605 
Symbol 
ID4808207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp740565 
End bp741677 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content40% 
IMG OID640106019 
ProductPgdS peptidase. cysteine peptidase. MEROPS family C40 
Protein accessionYP_001037033 
Protein GI125973123 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000243263 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAAGT TTAACAAGGT TTTCATGTAC ATAACTGCTT CGGCTTTGTC TGTTTCTTTA 
TGGACATGTA CTTCTTTTGC ACAGCAGAAC AAAACGGGAG TAACTACTGC AAGCATGCTT
AATATGCGTG AAAATCCCAG CACTTCGACG AAAATCATAG ACCAAATTCC AAATGGAACC
AAGGTTGATA TAATAGAAAC TTCAAACGGT TGGTATAAAA TTTCGTACAA TGGCAAGACA
GGATGGGTTT ACGGTTCTTA TGTTAAAGTA ACGGAGACAC CAAAACTGAC TGTGACGGAT
GAAACGATAT TGGCGACTTT GAATAAAGGT TCTACCGGTA ATTCTTCAAC CAATTCTTCT
ACAAATAATT CTGCTGTCAA CAATTCTTCC AGTCAAGTGG TCGATGAAAC CATTCAAAAA
CCTGCTCAAA ATGCTGCATC CGGAGAAAAC ACTGAAAATA CCGTTGTAAA AACAGGAATT
GTGAAAGCTT CGGCTCTGAA TGTAAGGCAG GGACCGGGTA CTTCCTATAG TATTATTAAT
CAGCTTTCAA ACGGCGCAAA GGTAAATATA ATAAAAGAAG AGTCCGGCTG GTATCAAATC
AAGCTGGCAA ACGGTTCTAC AGGTTGGGTT TCAGGTACAT ATGTGAATGT CAATACTACC
ATTGCTTCAA GAGGAGGACT TTCTGAAAAT TCAGCTCCGG CAGCTTCAAA TAACAGCGAT
GTGTCCGGTG TGAGACAGCA GGTTGTTGAA TATGCCAAGA AATTTTTAGG AGTCAAATAT
GTATATGGAG GAAATTCGCC TTCTCAGGGA TTTGACTGTT CCGGTTTTGT AAAATATGTG
TTCAGCAATT TTGGTATTAA TCTTGAAAGG GTTGCCGCAA GTCAGGCAAA GCAGGGTACA
TGGGTTTCCA AGGATCAATT GCTGCCCGGC GACCTCGTAT TTTTCGATAC CGACGGAGGA
CATAATTATA TTAACCATTC CGGCATATAC ATAGGAGATG GAAAGTTTAT TCATGCATCA
TCGGGAAGCG GCAAGAAGAG TGTTGTTATA AGTGACCTTA CGAGCGGGTT TTATGCCAAC
ACTTATATGA CCGCGAGAAG AGTTTTAAAT TAA
 
Protein sequence
MLKFNKVFMY ITASALSVSL WTCTSFAQQN KTGVTTASML NMRENPSTST KIIDQIPNGT 
KVDIIETSNG WYKISYNGKT GWVYGSYVKV TETPKLTVTD ETILATLNKG STGNSSTNSS
TNNSAVNNSS SQVVDETIQK PAQNAASGEN TENTVVKTGI VKASALNVRQ GPGTSYSIIN
QLSNGAKVNI IKEESGWYQI KLANGSTGWV SGTYVNVNTT IASRGGLSEN SAPAASNNSD
VSGVRQQVVE YAKKFLGVKY VYGGNSPSQG FDCSGFVKYV FSNFGINLER VAASQAKQGT
WVSKDQLLPG DLVFFDTDGG HNYINHSGIY IGDGKFIHAS SGSGKKSVVI SDLTSGFYAN
TYMTARRVLN