Gene Cthe_0577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0577 
Symbol 
ID4808252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand+ 
Start bp705303 
End bp705941 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content39% 
IMG OID640105991 
Productthiamine pyrophosphokinase 
Protein accessionYP_001037006 
Protein GI125973096 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1564] Thiamine pyrophosphokinase 
TIGRFAM ID[TIGR01378] thiamine pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGTATG CTCTTATTGT TTGTAACGGA AGCATTATAG ATTATTCATT TTACAGAAAA 
TTTTTTGATG AAGCTGATTT TATTGTTTGT GCCGACGGTG GAGCTTTACA TCTGCAGAGG 
CTGGGAATAA AGCCGGATGT TCTGTTGGGA GATTTTGATT CTATAGAAAG TGAACATCTT 
GAATACTACA TGAAGCAGAA TGTGGAGATA TTGAAGTTTC CGGCGGAAAA GGACATGACG 
GACACGGAGC TTGCGGTAAA TACGGCCATT GACAGAGGTT ACAAAAATAT TGTGATAATC 
GGAGGCACCG GTACAAGACT GGATCACACT TTGTCGAATA TTTTTCTGCT AAAGCTGATG 
CTTGACAGAG GAGTAAAGGG CAGAATCATA AATGAATACA ATGAAATGTT TTTGATTAAT 
GACAGTACTG AGATTGAAGC CGAAGACGGA TGTTATCTTA CACTGTTGCC TCTTACTTCA 
AAGGTGGAAG GTATAACTAC GGAAGGACTT TATTATCCCC TTAGGGGAGA GGCTATTGAA 
ATGGGGTCAA CCAGAGGGGT AAGCAATTGT TTTGTTGAAA AAAAGGCGCG GATATCAATA 
ACATCAGGTA TTTTGATTGC TATAAAAACA AGAGAATAA
 
Protein sequence
MMYALIVCNG SIIDYSFYRK FFDEADFIVC ADGGALHLQR LGIKPDVLLG DFDSIESEHL 
EYYMKQNVEI LKFPAEKDMT DTELAVNTAI DRGYKNIVII GGTGTRLDHT LSNIFLLKLM 
LDRGVKGRII NEYNEMFLIN DSTEIEAEDG CYLTLLPLTS KVEGITTEGL YYPLRGEAIE 
MGSTRGVSNC FVEKKARISI TSGILIAIKT RE