| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0543 |
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| Symbol | |
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| ID | 4808292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 663788 |
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| End bp | 666007 |
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| Gene Length | 2220 bp |
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| Protein Length | 739 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640105957 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001036972 |
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| Protein GI | 125973062 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAGAAAA TTTTGGCGTT TTTGCTGACA GTTGCGCTGG TGGCAGTAGT GGCCATTCCA
CAAGCCGTGG TAAGTTTTGC TGCGGATTTC AACTATGGTG AGGCACTTCA GAAAGCAATA
ATGTTTTATG AGTTCCAGCG CTCGGGAAAA CTGCCCGAAA ACAAAAGAAA CAACTGGCGT
GGAGATTCCG CTCTTAATGA CGGCGCAGAC AACGGTTTGG ACCTTACAGG CGGTTGGTAT
GATGCCGGTG ACCATGTAAA GTTCAACCTT CCGATGGCCT ATGCCGTTAC CATGCTCGCA
TGGAGTGTTT ATGAATCCCG GGATGCGTAT GTACAAAGCG GACAGCTTCC TTACATACTG
GACAATATTA AATGGGCTAC CGACTACTTT ATAAAATGCC ATCCAAGTCC AAATGTATAT
TATTATCAGG TGGGAGACGG AGCATTGGAC CATTCATGGT GGGGACCTGC TGAAGTAATG
CAGATGCCAA GACCGTCCTT CAAAGTGGAT TTGACCAATC CGGGTTCGAC TGTGGTTGCT
GAGACGGCAG CGGCTATGGC TGCATCCTCA ATTGTTTTCA AGCCTACAGA CCCGGAATAT
GCTGCCACAC TTTTAAGGCA TGCGAAAGAA CTCTTTACTT TTGCCGACAC CACAAGAAGT
GACGCAGGAT ATAGAGCGGC AGAGGGATAC TATTCATCCC ACAGCGGTTT TTATGATGAA
CTTACCTGGG CGAGTATATG GCTGTATCTT GCAACAGGAG ACCAGTCTTA TCTTGATAAA
GCAGAATCCT ATGAACCTCA TTGGGAAAGG GAAAGAGGTA CAACTTTAAT TAGTTATTCC
TGGGCTCATT GCTGGGATAA CAAATTGTAC GGTTCTTTGC TTTTGTTAGC AAAAATTACC
GGCAAGTCTT ATTACAAGCA ATGTATTGAA AACCATCTTG ACTATTGGAC CGTCGGATTT
AACGGAAGCA GAGTTCAATA TACTCCAAAA GGACTCGCAT ATCTTGACAG ATGGGGTTCA
TTGAGATATG CAACCACACA GGCGTTCCTT GCCAGCGTTT ATGCGGACTG GTCCGGCTGT
GACCCGGCTA AGGCGGCTGT CTACAAGGAA TTTGCAAAAA AACAGGTGGA TTATGCATTA
GGAAGCACAG GAAGAAGCTT TGTAGTAGGT TTTGGAAAAA ATCCGCCAAG AAATCCTCAC
CACAGGACGG CCCACAGCTC ATGGAGCGCT TTAATGACCG AACCTGCGGA GTGCAGACAT
ATTCTGGTGG GTGCATTGGT TGGCGGACCG GACGGTTCGG ATTCATATGT TGACAGGCTC
GATGATTATC AGTGCAATGA GGTGGCCAAC GACTATAATG CTGGATTTGT AGGTGCTCTT
GCCAAGATGT ATGAGAAGTA TGGCGGAGAA CCGATTCCGA ATTTCGTTGC TTTTGAAACA
CCGGGGGAAG AATTTTATGT TGAAGCTGCG GTAAATGCTG CAGGACCCGG TTTTGTAAAT
ATCAAAGCTT CAATAATCAA CAAGTCCGGT TGGCCGGCAA GAGGTTCAGA TAAATTGTCA
GCCAAGTATT TTGTCGATAT TTCCGAAGCT GTTGCAAAAG GCATTACTTT GGATCAAATT
ACCGTTCAGT CGACTACTAA TGGCGGAGCC AAGGTTTCAC AGCTTCTTCC GTGGGATCCG
GACAATCATA TTTATTATGT AAACATTGAC TTTACGGGAA TAAACATATT CCCCGGAGGA
ATAAATGAAT ACAAGAGGGA TGTATATTTC ACTATTACGG CGCCGTATGG AGAGGGTAAC
TGGGACAATA CCAACGACTT CTCCTTCCAG GGACTTGAGC AGGGCTTTAC AAGCAAAAAG
ACTGAATATA TACCGTTGTA TGACGGTAAT GTGAGAGTAT GGGGTAAAGT ACCGGACGGA
GGTTCGGAGC CCGATCCGAC GCCGACAATC ACCGTTGGCC CCACTCCTTC GGTTACACCG
ACATCAGTAC CTGGAATAAT GCTCGGAGAT GTGAATTTTG ACGGAAGAAT AAACTCGACG
GATTATTCAC GCTTAAAAAG ATATGTAATA AAGTCTTTGG AATTCACAGA TCCTGAAGAG
CACCAGAAGT TCATTGCAGC TGCGGATGTT GACGGGAACG GAAGAATAAA CTCCACAGAT
TTGTATGTGC TCAACAGGTA CATATTAAAA CTTATTGAAA AATTCCCGGC TGAACAGTAA
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| Protein sequence | MKKILAFLLT VALVAVVAIP QAVVSFAADF NYGEALQKAI MFYEFQRSGK LPENKRNNWR
GDSALNDGAD NGLDLTGGWY DAGDHVKFNL PMAYAVTMLA WSVYESRDAY VQSGQLPYIL
DNIKWATDYF IKCHPSPNVY YYQVGDGALD HSWWGPAEVM QMPRPSFKVD LTNPGSTVVA
ETAAAMAASS IVFKPTDPEY AATLLRHAKE LFTFADTTRS DAGYRAAEGY YSSHSGFYDE
LTWASIWLYL ATGDQSYLDK AESYEPHWER ERGTTLISYS WAHCWDNKLY GSLLLLAKIT
GKSYYKQCIE NHLDYWTVGF NGSRVQYTPK GLAYLDRWGS LRYATTQAFL ASVYADWSGC
DPAKAAVYKE FAKKQVDYAL GSTGRSFVVG FGKNPPRNPH HRTAHSSWSA LMTEPAECRH
ILVGALVGGP DGSDSYVDRL DDYQCNEVAN DYNAGFVGAL AKMYEKYGGE PIPNFVAFET
PGEEFYVEAA VNAAGPGFVN IKASIINKSG WPARGSDKLS AKYFVDISEA VAKGITLDQI
TVQSTTNGGA KVSQLLPWDP DNHIYYVNID FTGINIFPGG INEYKRDVYF TITAPYGEGN
WDNTNDFSFQ GLEQGFTSKK TEYIPLYDGN VRVWGKVPDG GSEPDPTPTI TVGPTPSVTP
TSVPGIMLGD VNFDGRINST DYSRLKRYVI KSLEFTDPEE HQKFIAAADV DGNGRINSTD
LYVLNRYILK LIEKFPAEQ
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