Gene Cthe_0509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0509 
Symbol 
ID4808309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand- 
Start bp620839 
End bp621918 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content40% 
IMG OID640105922 
Productsodium ion-translocating decarboxylase, beta subunit 
Protein accessionYP_001036939 
Protein GI125973029 
COG category[C] Energy production and conversion 
COG ID[COG1883] Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit 
TIGRFAM ID[TIGR01109] sodium ion-translocating decarboxylase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTGGC AAAACATTGC CATGTTTATT ATTGCAGGTA TACTTATTTA CCTTGCAATA 
GCGAAAGAAT ATGAACCAAC TCTTTTACTT CCTATCGGAT TCGGCACAAT TCTGGCAAAC 
ATACCTTTTT CAAATGCTTT AGGTGAAGAG GGTGTATTAA GCATCTTATA CAACGCAGGA 
ATAAAGACTG AACTTTTTCC GGTATTAATT TTTATCGCCG TAGGTGCGAT GATTGATTTC 
GGTCCATTAC TCAAAAATCC GTTTATGTTG TTCTTCGGTG CAGCCGCCCA GTTCGGTATT 
TTTGCTACAA TGCTGGTTGC AACTTTACTC GGTTTTGATT TAGCTGAAGC TGCTACAATC 
GGTATCATTG GTGCTGCTGA CGGTCCTACT TCCATAGTCG TTGCCCAAAA ACTTGCTCCG 
GGTCTTATCG GTCCCATTAC CGTAGCCGCA TATTCTTACA TGTCTCTGGT TCCGATAATT 
CAACCTCCGG TTATCAAACT CCTCACCACT AAAAAAGAAA GACTTATAAG GATGGAATAC 
ACCGAGGAAA AAGTACCAAA GTCAGTCAAA ATTTTGTTTC CCATAATAGT TACATTGCTG 
GCCGGACTTA TTGCACCATC CAGTGTCGCC CTTGTAGGAT TCTTAATGTT TGGAAACCTT 
ATCAGGGAAT GTGGTGTGCT GGAGAGACTA TCCAAATCCG CTCAAAACGA ACTTGCCAAT 
ATTGTAACCA TACTTTTGGG TATTACAATA GGTTCAACAA TGGTAGGAGA GCAATTCCTT 
AATAAGCGTA CATTGTTAAT TATCGGTTTG GGACTGGTTG CTTTCATATT TGACACTGCC 
GGCGGAGTAA TTTTTGCAAA AATATTGAAT TTGTTCTTAA AGAAAAAAAT AAACCCAATG 
ATCGGTGCTG CAGGAATTTC CGCATTTCCA ATGTCTGCTA GGGTTGTTCA GCAGTTGGCT 
ACCAAGGAGG ATCCTACAAA CTTCATAATA GCACAATCCA TTAGTGCAAA TGTTTCCGGA 
CAATTAGGTT CAATAGTTGC CGGTGGTATG ATCCTTGCAC TGGTTCCACT ATTTATGTAA
 
Protein sequence
MSWQNIAMFI IAGILIYLAI AKEYEPTLLL PIGFGTILAN IPFSNALGEE GVLSILYNAG 
IKTELFPVLI FIAVGAMIDF GPLLKNPFML FFGAAAQFGI FATMLVATLL GFDLAEAATI 
GIIGAADGPT SIVVAQKLAP GLIGPITVAA YSYMSLVPII QPPVIKLLTT KKERLIRMEY 
TEEKVPKSVK ILFPIIVTLL AGLIAPSSVA LVGFLMFGNL IRECGVLERL SKSAQNELAN 
IVTILLGITI GSTMVGEQFL NKRTLLIIGL GLVAFIFDTA GGVIFAKILN LFLKKKINPM 
IGAAGISAFP MSARVVQQLA TKEDPTNFII AQSISANVSG QLGSIVAGGM ILALVPLFM