| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0448 |
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| Symbol | |
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| ID | 4808376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 563358 |
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| End bp | 564131 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640105862 |
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| Product | sporulation sigma factor SigG |
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| Protein accession | YP_001036879 |
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| Protein GI | 125972969 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02850] RNA polymerase sigma-G factor
[TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02980] RNA polymerase sigma-70 factor, sigma-B/F/G subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000243038 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAGTCA ATAAAGTAGA AATATGTGGT GTGAACACAT CAAAGTTGCC AGTACTTACC
AATGAACAAA AGAAAGAGCT CTTCGAAAGA ATGCATAAAG GAGATACCTC GGCAAGAGAG
GAATTTATAA AGGGAAATTT GAGGCTTGTG TTAAGTGTTA TCCAGAGATT TAACAATAGA
GGGGAATATG TTGACGACCT TTTTCAGGTC GGATGTATAG GTCTTATAAA GGCAATTGAC
AATTTTGACG TTACTCAGAA TGTTAAGTTT TCCACATATG CTGTTCCCAT GATAATTGGA
GAAATCCGAA GATATTTGAG GGACAACAAT GCGATTCGTG TAAGCAGATC TTTGAGAGAT
ATTGCCTATA AAGCGCTTCA GGCAAAAGAA AAACTTACAA ATCAAAATTC AAAAGAGCCT
ACCATAGAGG AAATAGCCAA AGAACTGGGC CTTCCAAAGG AAGAAGTTGT GTTTGCTTTG
GATGCAATAC AGGATCCGAT TTCTCTGTTT GAATCCGTGT ATCATGACGG TGGAGATGCA
ATTTATGTGA TGGACCAGGT AAAAGACGAG AAAAATAATG ATGAAAACTG GCTTGAAGGT
ATAGCTTTAA GTGAAGCTAT GAGAAAACTC AATGACCGGG AAAAGCTTAT ACTGAATTTG
CGCTTTTTTG ACGGCAGAAC CCAGATGGAA GTTGCTGAAG AAATAGGAAT ATCGCAGGCC
CAGGTTTCAA GACTTGAAAA AACTGCGCTT ATGCATATGA GAAAGTATAT TTGA
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| Protein sequence | MLVNKVEICG VNTSKLPVLT NEQKKELFER MHKGDTSARE EFIKGNLRLV LSVIQRFNNR
GEYVDDLFQV GCIGLIKAID NFDVTQNVKF STYAVPMIIG EIRRYLRDNN AIRVSRSLRD
IAYKALQAKE KLTNQNSKEP TIEEIAKELG LPKEEVVFAL DAIQDPISLF ESVYHDGGDA
IYVMDQVKDE KNNDENWLEG IALSEAMRKL NDREKLILNL RFFDGRTQME VAEEIGISQA
QVSRLEKTAL MHMRKYI
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