Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0421 |
Symbol | spoVFB |
ID | 4808424 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 529786 |
End bp | 530370 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640105835 |
Product | dipicolinate synthase subunit B |
Protein accession | YP_001036852 |
Protein GI | 125972942 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0452] Phosphopantothenoylcysteine synthetase/decarboxylase |
TIGRFAM ID | [TIGR02852] dipicolinic acid synthetase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGCTGG AAGGGATTAA AATTGGGTTT GGACTTACCG GTTCCTTCTG CACCATAGAC AAAGTAATAC CCGAGATTGA AAAGCTTGTA AGCAACGGTG CAAAGGTTTT CCCCATACTG TCGGGTTCGG TAAGCAAATT TGATACAAGG TTTGGAAGAG CGGAGGATTT AAGGCTCAAA CTTGAAGGGA TTACGGGAAA CAAAGTTATA GACAGCATTG TTGATGCAGA GCCAATAGGT CCGAAATCTC TTCTTGATAT AATGGTTGTA GCGCCGTGTA CCGGCAATAC CCTGGCAAAA ATTGCAAATG GAATAACCGA CACAACGGTA ACTATGGCGT GCAAGGCTCA TCTTAGGAAT CAAAAGCCGG TGGTTTTGTC TATTTCTACA AATGACGGGC TAGGCGCAAA TGCAAAAAAC ATTGGATTGC TTTTAAATAT GAAAAATATA TATCTTGTAC CTTTTGGCCA GGACGGACCG GGTACCAAGC CGAATTCTTT GGTTGCAGAC ACAACACAGA TAATGCCGAC AATCCTCGAA GCTTTAAATC ATAAGCAGAT TCAGCCGATA CTTATTAAAT ATTGA
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Protein sequence | MLLEGIKIGF GLTGSFCTID KVIPEIEKLV SNGAKVFPIL SGSVSKFDTR FGRAEDLRLK LEGITGNKVI DSIVDAEPIG PKSLLDIMVV APCTGNTLAK IANGITDTTV TMACKAHLRN QKPVVLSIST NDGLGANAKN IGLLLNMKNI YLVPFGQDGP GTKPNSLVAD TTQIMPTILE ALNHKQIQPI LIKY
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