| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0398 |
|---|
| Symbol | |
|---|
| ID | 4808401 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 495575 |
|---|
| End bp | 495895 |
|---|
| Gene Length | 321 bp |
|---|
| Protein Length | 106 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640105812 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001036829 |
|---|
| Protein GI | 125972919 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0393] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000000107451 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTATAA CCACAACAAA CGGGATAGAA GGCAAAAGAG TTGTTGAATA CAAGGGCATA
GTTTGCGGAG AGGTAATTTC CGGTGTGGAC TTCATAAAGG ATTTTGCAGC GGGCCTTACG
AATTTTTTCG GCGGCCGTTC AAAATCATAT GAAGGCGAAT TGATTGAGGC CAGAGAGGGA
GCAATTCGTG AAATGAAAGA AAGAGCGATT CAGATGGGTG CCAATGCAAT AATAGGAGTG
GATATTGACT ATGAGGTACT TGGACAAGGC GGAAACATGC TTATGGTAAC GGCTTCCGGT
ACTGCGGTGG TAATAGAGTA A
|
|---|
| Protein sequence | MIITTTNGIE GKRVVEYKGI VCGEVISGVD FIKDFAAGLT NFFGGRSKSY EGELIEAREG
AIREMKERAI QMGANAIIGV DIDYEVLGQG GNMLMVTASG TAVVIE
|
|---|
| |