Gene Cthe_0367 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0367 
Symbol 
ID4808444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp461825 
End bp462694 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content40% 
IMG OID640105781 
ProductNADP oxidoreductase, coenzyme F420-dependent 
Protein accessionYP_001036798 
Protein GI125972888 
COG category[S] Function unknown 
COG ID[COG5495] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00112] pyrroline-5-carboxylate reductase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.288045 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATAG GGATTATCGG AGCAGGAAAG GTAGGCTGTG CCTTGGCCGA AGGACTTAAA 
AACAACGGAT TTAACATATC CGGAGTTTAC AGCCGAAGTG TCGGTTCTCA AAAATATCTT
TGCGAAAAAC TTGGCAAAAT CTTTGAAAAC GACCTTGAGG ATGCGGTAAA AAACTCCGAC
GTGATATTTA TTTCGGTGTC TGATAATAAT ATAATAGAGG TTGCGGAAGA AATTGTTCGA
AAAGTTGATA ACGATGCTCT TCGTTCAAAA ACTTTTATTC ATATGAGCGG AGCGCTCACA
GCAAAAGCCT TAAAGCCTCT TGAAAACCTT GGAGCGTACA CCGGCTCTCT TCATCCCATT
CAGTCCGTAG CGGACAAAGA CAGCGGATGG AAGAAGCTGT ACAATATATA TTATGGTTTT
GAAGGCTGTG AAGAAGCATT AAAGCATGCT TTAACCGTTG TAAAATCTTT TGAGGGCAAA
CTGATAAAAA TAAAGGAACA GGACAAAACG CTGTATCACG CCGCAGCATG TATTATATCC
AACTATACGG TGACCCTTTC CTATGTTGCT TATAAAATAT TGGAAAGTAT AGGGTTTGAC
AGGGAAACTG CTGACAAAGC GTTTCTTCCG CTGATTAAAA ACACCGTTCA TAATATCGAA
AGGCTCGGAA GCATAGATGC ACTTACCGGT CCGGTGTCGA GAGGAGATAA CAGTGTTGTT
GAGCAGCATG TAAAATCTTT GAGGGCGCTG GACAAAGAAC TTGAAAAGAT GTATAAAGTA
ATTGGAAGAA TGACCGTTGA GGTCGCTCAA AAAAAAGGTA CACTGAATGA TGATGCGTTT
CAAAAGCTTA TGAAAATTTT AGAGCTGTAA
 
Protein sequence
MNIGIIGAGK VGCALAEGLK NNGFNISGVY SRSVGSQKYL CEKLGKIFEN DLEDAVKNSD 
VIFISVSDNN IIEVAEEIVR KVDNDALRSK TFIHMSGALT AKALKPLENL GAYTGSLHPI
QSVADKDSGW KKLYNIYYGF EGCEEALKHA LTVVKSFEGK LIKIKEQDKT LYHAAACIIS
NYTVTLSYVA YKILESIGFD RETADKAFLP LIKNTVHNIE RLGSIDALTG PVSRGDNSVV
EQHVKSLRAL DKELEKMYKV IGRMTVEVAQ KKGTLNDDAF QKLMKILEL