Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0367 |
Symbol | |
ID | 4808444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 461825 |
End bp | 462694 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640105781 |
Product | NADP oxidoreductase, coenzyme F420-dependent |
Protein accession | YP_001036798 |
Protein GI | 125972888 |
COG category | [S] Function unknown |
COG ID | [COG5495] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00112] pyrroline-5-carboxylate reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.288045 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATAG GGATTATCGG AGCAGGAAAG GTAGGCTGTG CCTTGGCCGA AGGACTTAAA AACAACGGAT TTAACATATC CGGAGTTTAC AGCCGAAGTG TCGGTTCTCA AAAATATCTT TGCGAAAAAC TTGGCAAAAT CTTTGAAAAC GACCTTGAGG ATGCGGTAAA AAACTCCGAC GTGATATTTA TTTCGGTGTC TGATAATAAT ATAATAGAGG TTGCGGAAGA AATTGTTCGA AAAGTTGATA ACGATGCTCT TCGTTCAAAA ACTTTTATTC ATATGAGCGG AGCGCTCACA GCAAAAGCCT TAAAGCCTCT TGAAAACCTT GGAGCGTACA CCGGCTCTCT TCATCCCATT CAGTCCGTAG CGGACAAAGA CAGCGGATGG AAGAAGCTGT ACAATATATA TTATGGTTTT GAAGGCTGTG AAGAAGCATT AAAGCATGCT TTAACCGTTG TAAAATCTTT TGAGGGCAAA CTGATAAAAA TAAAGGAACA GGACAAAACG CTGTATCACG CCGCAGCATG TATTATATCC AACTATACGG TGACCCTTTC CTATGTTGCT TATAAAATAT TGGAAAGTAT AGGGTTTGAC AGGGAAACTG CTGACAAAGC GTTTCTTCCG CTGATTAAAA ACACCGTTCA TAATATCGAA AGGCTCGGAA GCATAGATGC ACTTACCGGT CCGGTGTCGA GAGGAGATAA CAGTGTTGTT GAGCAGCATG TAAAATCTTT GAGGGCGCTG GACAAAGAAC TTGAAAAGAT GTATAAAGTA ATTGGAAGAA TGACCGTTGA GGTCGCTCAA AAAAAAGGTA CACTGAATGA TGATGCGTTT CAAAAGCTTA TGAAAATTTT AGAGCTGTAA
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Protein sequence | MNIGIIGAGK VGCALAEGLK NNGFNISGVY SRSVGSQKYL CEKLGKIFEN DLEDAVKNSD VIFISVSDNN IIEVAEEIVR KVDNDALRSK TFIHMSGALT AKALKPLENL GAYTGSLHPI QSVADKDSGW KKLYNIYYGF EGCEEALKHA LTVVKSFEGK LIKIKEQDKT LYHAAACIIS NYTVTLSYVA YKILESIGFD RETADKAFLP LIKNTVHNIE RLGSIDALTG PVSRGDNSVV EQHVKSLRAL DKELEKMYKV IGRMTVEVAQ KKGTLNDDAF QKLMKILEL
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