| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0363 |
|---|
| Symbol | |
|---|
| ID | 4808440 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 454648 |
|---|
| End bp | 455820 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640105777 |
|---|
| Product | aminotransferase |
|---|
| Protein accession | YP_001036794 |
|---|
| Protein GI | 125972884 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATATTG CAGAAATGGT TTTGCCGACT GTCAGACAGG TACCTCCTTC AGGGATCAGG
AAGTTTTTTG ATTTGGTAAA TGAAATGAAG GATGCCATAT CCTTAAGTAT TGGTGAGCCT
GATTTTGTAA CTCCGTGGAA TATCCGGGAG GCCGGTATTT ATTCGCTGGA AAAAGGGCAT
ACCCACTATT CGCCAAATGC GGGATTTATG GAGCTGCGTG AAGAGATATG CAAGTATCAG
GAGAGAAAAT ACAATTTAAA ATATGATCCA AAGACCCAGG TTATTGTAAC CGTAGGAGGA
AGTGAGGGAA TTGACATAGC TTTAAGGGCT CTTGTCGGAC CCGGAGATGA AGTGATTATT
CCTGAACCTT GTTTTGTTGC CTATAAACCA TGCACTATTT TCACCGGAGC TACTCCTGTG
ATAGTAAATT TGAGCGCGGA AAACGAGTTT CGGCTGACAC CGGAACTTTT GGAAAAGGCA
ATTACCGACA GAACTAAAGT GTTGATTTTG CCTTATCCCA ACAATCCTAC AGGCGCCGTT
ATGGAAAAAA AGGATTTAGA GGCTATTGTT GAAGTACTTA AGGACAAAGA CATAATTGTT
ATTTCCGATG AGATTTATTC TGAGCTTACT TACGGAGTTA AGCATGTATC CATAGCGTCT
TTTCCTGAGA TGAAGGATAA GACGGTGGTT ATAAACGGCT TTTCCAAAGC CTATGCCATG
ACGGGCTGGA GACTTGGATA TTGCTTGGGG CATCCTGATT TGATTTCACA GATGTACAAG
ATACATCAAT ATGCCATAAT GTGTTCTCCG ACAACTGCCC AATATGCAGC CATAGAAGCT
TTAAGAAACA GTGATGATGA TGTGGAAGCA ATGGTCAGAG AGTACAACCG AAGAAGAAGA
ATTATGGTTG AAGGTTTCAG GAGTGCAGGG CTTGAATGTT TTGAGCCGTT GGGTGCTTTT
TATGTTTTTC CGTGCATAGA ATCAACAGGA ATGACTTCGT ATGAGTTTTC CGAAAGGCTT
TTAATGGAGG AAAAAGTTGC GGTAGTTCCG GGGACTGCTT TTGGAGAATG TGGAGAAGGA
TATGTACGTT CGTGCTATGC CAGCTCCATG GACAATATAA TTGAAGCAAT GAAAAGAATT
AAAAGATTTG TCGAAAGAAA TAGAAAGAAG TAA
|
|---|
| Protein sequence | MNIAEMVLPT VRQVPPSGIR KFFDLVNEMK DAISLSIGEP DFVTPWNIRE AGIYSLEKGH
THYSPNAGFM ELREEICKYQ ERKYNLKYDP KTQVIVTVGG SEGIDIALRA LVGPGDEVII
PEPCFVAYKP CTIFTGATPV IVNLSAENEF RLTPELLEKA ITDRTKVLIL PYPNNPTGAV
MEKKDLEAIV EVLKDKDIIV ISDEIYSELT YGVKHVSIAS FPEMKDKTVV INGFSKAYAM
TGWRLGYCLG HPDLISQMYK IHQYAIMCSP TTAQYAAIEA LRNSDDDVEA MVREYNRRRR
IMVEGFRSAG LECFEPLGAF YVFPCIESTG MTSYEFSERL LMEEKVAVVP GTAFGECGEG
YVRSCYASSM DNIIEAMKRI KRFVERNRKK
|
|---|
| |