Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0351 |
Symbol | |
ID | 4808500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 440776 |
End bp | 442167 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640105765 |
Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
Protein accession | YP_001036782 |
Protein GI | 125972872 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTACATA AAAAGAAAAC AGCTGTTATA ACCGGTGTGG CGGTTTTGGT TGGTATAGTG ATTATTGCTT TGGCGGTGGG ATATAATTAT TATTCCAAAA GAAACAAGCC CCAGGAGTCC AAAGAGTTTG GTTTTCAGGC TCTTAAAATT AACGGCACTT ATGTGAGTAC AGATATTATG AAAGAAGAAA GGAATAAGTT TTTTGAAAAG TATAAAAGAA ATGCGGATGT TTTGAGAATG AATGATCACG AACGCAATGA CATGCTTTTG GACCAGGTGA TTGAAAGACT TTTACTGGAA GACTATGTAA ACAACAAATC CGGTGTAACT GCAACGGACA GTGAAGTGGA GGATTACATA AACAGGTTTA TTAAACCAAG ATACGGAGAT TCCCTCGGTA CATTTATGAG TTCCCAGGGG TACACAAACG AAGAGGAGAT GAAAGCCGGT ATCAAGGAGT ACATATTAAA GCACAAAGCC TTGTACAAAG CTGCAAAAGA GAAAAATGTG ACTTTGACCG AGCAGGAACT GGATGAAGGC TACGAAAAAC ACAAGATTCA AAACAAGAAA GTTGACATAA GGCATATATT TATCTCCAGC CAGGAAAGGG GCAAGGAGGA GGCTAAAAAG CTGGCCGACG AGATTTATAA CAGACTTAAG AACAATGAAG ATTTTGAAAC TCTGGCAAAG CAATATTCCG ATGACGAGAA AACTAAAGAA TCGGGAGGAG TGATCACGGA ACTTCGAGCA GGTTTCAATG AAGCGGTCTT TGACAATGCG GTTTTTACGG CAGAGGCCGG GCAGTTGCTG GAGCCGATAG AGGTTGCCAG GGGATATGAG ATTGTATATG TGGACAAGGT TACGGATTTT TACAGAACCA GAGACGAGTA TGCGGAACTC CTTACAGTGG ATAAATTTAT GCAGTCCGAT GCATACAAGG AATGGTTCGA GGAATACAAG AAAAACTATG ATATAGAGAT AACGGATCCG GCAATGAAGG CGTTCAGGCT TTTCAGAGAA AAGCAGTATA ATGAAGCCGG AGCACTCTAT GAAGAACTTT ACAAGTCGGA AAAAGATGCA TACTATATTG AAATGGCATG TGAGGCATAC AAACTTGCCG AGAATTGGGC CGGACTTATT GAAGCTGGCA AATTGGCAGT TAAAGAAAAT CCTGATTTCG TTAATTATTA TTTATACCAG GCAGAGGGAG AATTTAAGGT CGGAGACGCC AATAAAGCTA AAGAGTTGTT GAAAGAGGCG GAGAAAAAGG CGGGAGACAA TACATATTTC CTGGATTTGA TTCGAAAAAT GTATGAGAGC CAGGGCCTTG CCGAAGATGT CGAAAGAATA GACCGGAAAT TTCAGGAAAT ATCTGAGAAA TTGAAAGGAT AA
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Protein sequence | MVHKKKTAVI TGVAVLVGIV IIALAVGYNY YSKRNKPQES KEFGFQALKI NGTYVSTDIM KEERNKFFEK YKRNADVLRM NDHERNDMLL DQVIERLLLE DYVNNKSGVT ATDSEVEDYI NRFIKPRYGD SLGTFMSSQG YTNEEEMKAG IKEYILKHKA LYKAAKEKNV TLTEQELDEG YEKHKIQNKK VDIRHIFISS QERGKEEAKK LADEIYNRLK NNEDFETLAK QYSDDEKTKE SGGVITELRA GFNEAVFDNA VFTAEAGQLL EPIEVARGYE IVYVDKVTDF YRTRDEYAEL LTVDKFMQSD AYKEWFEEYK KNYDIEITDP AMKAFRLFRE KQYNEAGALY EELYKSEKDA YYIEMACEAY KLAENWAGLI EAGKLAVKEN PDFVNYYLYQ AEGEFKVGDA NKAKELLKEA EKKAGDNTYF LDLIRKMYES QGLAEDVERI DRKFQEISEK LKG
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