Gene Cthe_0320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0320 
Symbol 
ID4808538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp403152 
End bp404618 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content38% 
IMG OID640105731 
Producthypothetical protein 
Protein accessionYP_001036751 
Protein GI125972841 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATTTTA TAACTGATTT AATACTAAAA TTGGATCCGG CCGGACTAAC AAGCGTATTT 
ATTATTTTAG CAGTCTTTGT ATTCTCCCTG ATCATCAATT TGTTTACCCG CGGAAAATAT
ATTGCAATAT ATAATGATTT GGAGAGAACT TGCAGCGCAA AAAATGAGAA ATTTGAAACC
GATCTTTTAA ATAAAATAGT TGAAACGTAT AAAAGCGCAT CCGTTGGCAA CTACAATCAT
GTTAACACCC GGGCGATAAT TGAAAACTGT TTCAACAGGC AATTAAAAAC GTTACTGGTG
TGCGAAAGAT TTGTAAAGCA TACTGCTTTA ATACTTGTCG CTTTGGGACT TTTGGGCACA
TTTTTGAGTT TGAGCCTTAA TCCTGTGGTC CAATCCGATG TTCTGTCAAA TTCTTCTTTT
GCCGATTTTC TTAATGATCT GATGCCCTGG GTGCGAAAAA TTGGTGTTGC TTTTACTGCA
AGTTTCTTTG GAATGGCATT TGCTGTTTTG TTTGCTTTGG TTAACATAGT TCTAAATGCC
GAGGATGCCC GCAGGAGATT GACGGCGCGG ATTGAAGAAT ATCTTGACAA TACTGTGTCA
CGTATAGTTG CAAAGGATAA GGAAACAGAA TACAACATGA TGAACAGAAT ACTCAAAGAA
ACCTTTGCTG AGTTCGGAAA GAGAATAGAG AAATCTCTCA AACAAACGGC TGACGCTTTT
GGACAAAAGC TTACCACCGT GGCAATGGAA GTGGATATCA CTTCAAAAAC TTTGGATAAC
ACGGTGGACA AATTTGACCG GGTACTTCAG AATTTTGCAG AAAACATAAA GGAATTTAAA
GAATTTAATG ACAACCTTAA AAACAATATT GAAAAAATGG ATGGAAACTT TGAAAAGGTT
GCACAAGCGC TCAACGATAC TTCAAGTATA CTTAAAGATA CATCAAAAAC AGTTGTTGAC
AACTATAATT CCGTTGAGAG TTTTTCAAAG AGCATTAGAA GTGTGTCGGA GGAAATAACC
GGCTACAGCG GAAGAATAGT TCAGGATATC AGCAATATCG CGGAGGAAGT GAAAGTTTCC
GTCTCATCCA TAAGAGAACT TGGAGAAGCA ATAAGAAACG ACCTGGTTGT AAGAACAGAG
GAGTTGAAAG ATTATCAGGA AAAATTCAAC ATCCTTACGT CCAGGCTAAG TGAAGAATTG
AACCTTTTGA GGGAGAAAAC GGCGGAAGCT TTTGAAAGGA GTCTTGATGA GAACAGTCAG
GTTGTGGCAG AAAAAATTAC CAATTACGTC GATAACGTTA TGAAAGGAGT TATGGAAATT
ATAAATGAAT TCAAGGAAAA TGAAAAGATT TTTGCAAAGA CGATAGTCAT GCTTCCGGAA
CAGATTACTG CATACAATGA AACCGCAGCC GCCCAAATGA GCAAACAGCT GGACGAGGTA
AAAAGGTTGT TTAGGAAATT TGAGTGA
 
Protein sequence
MHFITDLILK LDPAGLTSVF IILAVFVFSL IINLFTRGKY IAIYNDLERT CSAKNEKFET 
DLLNKIVETY KSASVGNYNH VNTRAIIENC FNRQLKTLLV CERFVKHTAL ILVALGLLGT
FLSLSLNPVV QSDVLSNSSF ADFLNDLMPW VRKIGVAFTA SFFGMAFAVL FALVNIVLNA
EDARRRLTAR IEEYLDNTVS RIVAKDKETE YNMMNRILKE TFAEFGKRIE KSLKQTADAF
GQKLTTVAME VDITSKTLDN TVDKFDRVLQ NFAENIKEFK EFNDNLKNNI EKMDGNFEKV
AQALNDTSSI LKDTSKTVVD NYNSVESFSK SIRSVSEEIT GYSGRIVQDI SNIAEEVKVS
VSSIRELGEA IRNDLVVRTE ELKDYQEKFN ILTSRLSEEL NLLREKTAEA FERSLDENSQ
VVAEKITNYV DNVMKGVMEI INEFKENEKI FAKTIVMLPE QITAYNETAA AQMSKQLDEV
KRLFRKFE