Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0276 |
Symbol | |
ID | 4808559 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 343980 |
End bp | 344939 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640105688 |
Product | 2-hydroxyacid dehydrogenase |
Protein accession | YP_001036708 |
Protein GI | 125972798 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTAAAGA TATGTGTTTT GGATGCCAAA ACTCTGGGAG ATGACGTGGA TCTGACGGTG TTTGATAAAT TTGGTCCTGT ACAGGTTTAT GCTGAAACAA AGCCGGAGGA AGTGGTTGAA AGGATTAAGG ATGTCGATGT CGTTATTACC AACAAAGTTG TGCTGAATAA AGAAAACCTT GAAAATGCCT CAAAACTCAA ACTGATTTGT GTGGCTGCGA CAGGAACCAA TAACATAGAT CTTGAATATG CGGCACAAAA GCAAATTGCC GTAACCAATG TGGCGGGATA CTCAACTATG AGTGTTGTAC AGCATACTTT TGCGATGCTG TTTTATTTGA TGGAGAATTT GCCTTATTAT GACAGGTATG TAAAGTCGGG AGAATATGCA AAGAGCAATA TTTTTACTCA TCATGAAAGG CCTTATCATG AATTGGCCGG TAAAACATGG GGTATCATAG GGCTTGGAAC CATTGGAAGA GCCGTGGCCA ATGCGGCGGA GGCTTTTGGA TGCAGGGTGG TTTACTACTC AACTTCGGGA AAAAACAATA ATACTCAGTA TGAAAGAGCT GAACTGGAGA AATTGTTGAA AGAGTCTGAC ATTGTGTCCA TTCATGCGCC GCTCAACAAT AACACAAGGG GCTTGATTGA TTATGAGCGT TTGCGTATGA TGAAGAAAAG TGCCATAATA TTAAATCTTG GACGCGGAGG CATTATCAGG GAGGAGGATT TGGCAAGGGC GCTGGATGAA GAATTGATAA GCGGAGCTGC TCTTGACGTT TTGGAAAAAG AGCCTGTAAA TTGTGACAAT CCTTTACTTG GTGTAAAAAA CAGTGACAGG CTTTTCATAA CTCCTCATAT TGCGTGGGCC AGCGTTGAAG CAAGAAAAAG ACTTGTTGAT GAAATAGCAT TGAATATTGA GGCTTTTATT GAGGGAAAAG AGCGCAACAG AGTATGCTGA
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Protein sequence | MLKICVLDAK TLGDDVDLTV FDKFGPVQVY AETKPEEVVE RIKDVDVVIT NKVVLNKENL ENASKLKLIC VAATGTNNID LEYAAQKQIA VTNVAGYSTM SVVQHTFAML FYLMENLPYY DRYVKSGEYA KSNIFTHHER PYHELAGKTW GIIGLGTIGR AVANAAEAFG CRVVYYSTSG KNNNTQYERA ELEKLLKESD IVSIHAPLNN NTRGLIDYER LRMMKKSAII LNLGRGGIIR EEDLARALDE ELISGAALDV LEKEPVNCDN PLLGVKNSDR LFITPHIAWA SVEARKRLVD EIALNIEAFI EGKERNRVC
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