Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0272 |
Symbol | |
ID | 4808555 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 335877 |
End bp | 337031 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640105684 |
Product | penicillin-binding protein 6 |
Protein accession | YP_001036704 |
Protein GI | 125972794 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0746018 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATAATT TAAAAGGTTT TCGTTCCGTC TCGGTTCTTG CCGTAATCAC TTTTTTTGTA ATGATGTTTC AGGTAAAAGC TTTTGCCCAG TTTGAATCTT CCGCCCAATC GGCAATTTTA ATTGAAGCCT CCACAGGACA GGTGCTGTAT GAAAAAAATG CTGACGTTCC AATGCCTCCT GCCAGCATAA CCAAAATCAT GACTCTCTTA CTCGGCTTCG AGGCTTTGGA AAAAGGATTG GTAAAATGGG ACGATGAAGT AATAATCTCG GAAAAGGCCT GGAGAATGGA AGGCTCCAAA ATGTTCCTGC TTGTAGGAGA CAAAGCTAAA TTTGGCGAGA TAATGACCGG TATATCCGTT GTCTCAGCCA ATGACGGATG TGTTGCCCTT GCAGAACATC TATATGGAAG TGAAGAAGCC TTTGTTCAGG TTATGAACAC TCGTGCAAAG GAGCTTGGGC TTACAAACAC AAACTTTGCA AACTCCAACG GTTTGCCGGC GGAAGGCCAT GTTATGAGTG CAAGAGATAT TTCCACATTG GCACGTTACT TAATACAGAA TTATCCCAAA ATTCTTGAGC TGGAATCCAC AACAGAGTAT ACCTACAACA ATATAAGGCA GTTTAACCGC AATCCTCTTC TAGGAGTTTT TCCCGGGGCT GACGGCTTAA AAACCGGTTG GACGGAAGAA GCAGGATATT GCATAGTTGG AACAGCCCAG CAAAATGGAC AAAGAATGAT AGGTGTCGTG CTGAAAACCA GCAGTGAAAA AGAACGCTCG AAAGCAATCC AGGAACTTTT AAACTATGGT TTTAAAAACT TTAAACAGGT AACAGTGAAA AATGCCGGTG AAATAGTTGA TTCCATAGAG GTTAAGAACG GTAAAAAACT TTCAGTTTCA TTGAAATTGG ACAGTGACAT TTCCACAGTA ATACCTGTCG GTAGGGAAAA CGACCTTCAG ATTGTGACAT CAAAAAAAGC AGAATTCCTT AATGCACCGG TATCTTTGGA TATTCCTGCA GGAACCGTTG AGGTTCAGCT TGACGGAAAA ACAATTGCAA CCTCAACCAT GTCCACTGCG GAAGAAGCGG AACGTCTTGG ATTTTTTGCC ATGATTTTAA GAAACATAGC CAACTTCTTT AAATCGCTGT TTTAG
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Protein sequence | MYNLKGFRSV SVLAVITFFV MMFQVKAFAQ FESSAQSAIL IEASTGQVLY EKNADVPMPP ASITKIMTLL LGFEALEKGL VKWDDEVIIS EKAWRMEGSK MFLLVGDKAK FGEIMTGISV VSANDGCVAL AEHLYGSEEA FVQVMNTRAK ELGLTNTNFA NSNGLPAEGH VMSARDISTL ARYLIQNYPK ILELESTTEY TYNNIRQFNR NPLLGVFPGA DGLKTGWTEE AGYCIVGTAQ QNGQRMIGVV LKTSSEKERS KAIQELLNYG FKNFKQVTVK NAGEIVDSIE VKNGKKLSVS LKLDSDISTV IPVGRENDLQ IVTSKKAEFL NAPVSLDIPA GTVEVQLDGK TIATSTMSTA EEAERLGFFA MILRNIANFF KSLF
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