Gene Cthe_0259 details

Gene Information

• Locus tag: Cthe_0259
• ID: 4808542
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium thermocellum ATCC 27405
• Kingdom: Bacteria
• Replicon accession: NC_009012
• Strand: +
• Start bp: 318752
• End bp: 319336
• Gene Length: 585 bp
• Protein Length: 194 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 640105671
• Product: rhomboid-like protein
• Protein accession: YP_001036691
• Protein GI: 125972781

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.000169722
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGTTTAC AAAATAGATT TAAGAGTTTG CATTATAATT CACCGGTTAT TCTGACAATG 
ACGCTTTTGT CGCTGGGAGC GTTGATACTT CAGAACATTA CCCGTGGCTA CACAACTTCG 
TTGCTGTTTT CAGTCTATCG CAGCAGTCCC TTCAGTATAT TTTTCTATTT CAGGCTTTTT 
GGACACGTGC TGGGACATGC AAACTGGGAG CATTACATGA ACAACTTTCT TCTTATTTTG 
CTTCTTGGGC CTATGCTTGA AGAAAAATAC GGCTCCAAGA GAATTGCTTT TATGATAGCG 
GTAACGGCCG TGGTTACAGG AGTTATAAAC ATACTGCTTT TTCCCAGAAC AGCCCTTTTG 
GGAGCAAGCG GAGTTGTTTT CATGTTTATT CTGCTAAGCT CTTTTGTTAA TTTTAAAAAG 
GGAAGAATAC CCATAACCTT TATACTTGTT GTTATAATTT ATCTGGGAGG AGAGGTTATG 
AACGGTATTT TTGTAAAAGA CAATATTTCA CAGCTAGCCC ATTTGGTGGG AGGAATCTGC 
GGAAGTGTGT TTGGTTTTAA ATGGGCGGAA AGGTCGTCCT GGTAG 

 

Protein sequence

MSLQNRFKSL HYNSPVILTM TLLSLGALIL QNITRGYTTS LLFSVYRSSP FSIFFYFRLF 
GHVLGHANWE HYMNNFLLIL LLGPMLEEKY GSKRIAFMIA VTAVVTGVIN ILLFPRTALL 
GASGVVFMFI LLSSFVNFKK GRIPITFILV VIIYLGGEVM NGIFVKDNIS QLAHLVGGIC 
GSVFGFKWAE RSSW