Gene Cthe_0243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0243 
Symbol 
ID4808591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp293795 
End bp294643 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content39% 
IMG OID640105655 
Productcopper amine oxidase-like protein 
Protein accessionYP_001036675 
Protein GI125972765 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3773] Cell wall hydrolyses involved in spore germination 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000258984 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAATG AAGGAAGGTG TAAAACAGGA AATTTTAAAG CCGTATTGGC CGTACTTATC 
GTAATTTTTG TAACTCTTTC AGGCAGCTTT AAAGCAAGTG CAATTAACAA GCAGATTTTC
ATTACTGTAA AGGTAAACGG CAACTATATT AAAATGGACA CGTGGCCGTA TATTAAAGAC
GGCAGGACAT TTGTATCAGT ACGCTTTGTC GCTGAAGCTC TCGGAGCAAA AGTGGAATGG
GATGGCGAAG ACAAGAAAGT TACAATAAAA GATGACTACA ATTATATTGA ATTGTTTGTC
GGAAGCAAAG AATGTTATAT TAACGCAGTG AAGCAAGCAA TGGATACCTC TCCTGAAATA
TCAAACGGAC GCACAATGGT GCCATTAAGG TTTGTATCTG AAGTTCTCGG ATGTTCAGTC
GATTGGAATC AGACAACATA TACAGTCTCA ATAAACAAAA ACGGCATTAA AGTTCCCGAA
GAATGTATAT ACCAAAGAAA TTATACCGAT GAGGATTTGA TTTGGCTTGC CAGGATAGTA
ACTGTTGAGG CAGGGGGAAT GTCTCTTGAG GGAAAACTTG CAGTTGCAAA TGTCGTATTA
AACAGAGTAA AAAGTCCTTC ATTTCCCAAT ACCGTGTATG ATGTTATATT TCAAAAAGGC
CAATTTCCTC CGGCATACAA GAGCGGCTTT AAAGAGTTGG TGCCCCCGGA CGAGTGTATT
ATTGCGGCAA AAATGGCTTT GGAGGGTGTC AACAACATTG GGAACTGTCT GTATTTCAAT
AACAGGCCGT TTACTTCAAG AAGCGGTACT TTTTATAAAA AAATAGAAGG TGAGTACTTC
TATTACTAA
 
Protein sequence
MSNEGRCKTG NFKAVLAVLI VIFVTLSGSF KASAINKQIF ITVKVNGNYI KMDTWPYIKD 
GRTFVSVRFV AEALGAKVEW DGEDKKVTIK DDYNYIELFV GSKECYINAV KQAMDTSPEI
SNGRTMVPLR FVSEVLGCSV DWNQTTYTVS INKNGIKVPE ECIYQRNYTD EDLIWLARIV
TVEAGGMSLE GKLAVANVVL NRVKSPSFPN TVYDVIFQKG QFPPAYKSGF KELVPPDECI
IAAKMALEGV NNIGNCLYFN NRPFTSRSGT FYKKIEGEYF YY