| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0182 |
|---|
| Symbol | ruvB |
|---|
| ID | 4808670 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 218239 |
|---|
| End bp | 219231 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640105593 |
|---|
| Product | Holliday junction DNA helicase RuvB |
|---|
| Protein accession | YP_001036616 |
|---|
| Protein GI | 125972706 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
|---|
| TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.107724 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGACA GGCTTGTCGG TTGCAGGCTT AGTGAAGAAG ATGTTGATGA GGTAAGTTTG
AGACCCAGAA AGTTCGGAGA ATATATCGGT CAGACAAAGG TCAAAGAGAA CCTTATGGTT
TTTATTGAGG CTGCAAAGAA GAGAAATGAA GCATTGGATC ATGTGCTTCT TTATGGACCT
CCCGGACTGG GGAAAACGAC CCTTGCCGGA ATAATAGCAT CCGAGTTGGG AGTTAATTTG
CGTATTACTT CCGGTCCGGC CATAGAAAAG CCGGGAGATT TGGCTGCCAT ACTTACCAAT
CTCGGCAATT TCGATGTCCT TTTTATAGAT GAGATTCACA GGCTGAACAG GAGTGTCGAG
GAAATATTGT ATCCTGCCAT GGAGGATTAT GCTTTGGATA TAATTATCGG AAAAGGCCCC
AGTGCCAGGT CAATCAGGCT TGACCTTCCG AAATTCACCC TGATAGGTGC CACCACCAGG
GCAGGGCTTC TGACATCTCC CTTAAGGGAC AGATTTGGAG TAATAAACAA GCTGGAATTG
TATAGTGTGG AAGAACTTGG ACAGATTGTG AAGAGATCTG CCAGGATTTT AAATGTCGGC
ATTGAAGATG AGGCGGCCGA AGAGATAGCC AGGCGCGCCA GAGGTACGCC AAGGGTTGCC
AACAGGATAT TAAAAAGAAT TAGGGATTTT GCCCAGGTAA AATCCGACGG GTTTATAACA
AAAGAGATTG CCAGAACAGG GCTTGAGGCT TTGGAAGTTG ATGAAATCGG TCTTGACGCG
GTGGACAGAA ATCTTCTTAT GAGTATTATT GAGAAATTTG GAGGCGGGCC GGTGGGACTT
GACACACTGG CGGCCACAAT AGGAGAAGAG CCGGATACGA TAGAGGATGT ATATGAACCT
TATCTTTTAC AGCTTGGATT TATAAACAAG ACTCCCCGGG GAAGAATGGC TACAAAACTT
GCCTATGAGC ATTTCGGGCT TAAATATGAA TAA
|
|---|
| Protein sequence | MEDRLVGCRL SEEDVDEVSL RPRKFGEYIG QTKVKENLMV FIEAAKKRNE ALDHVLLYGP
PGLGKTTLAG IIASELGVNL RITSGPAIEK PGDLAAILTN LGNFDVLFID EIHRLNRSVE
EILYPAMEDY ALDIIIGKGP SARSIRLDLP KFTLIGATTR AGLLTSPLRD RFGVINKLEL
YSVEELGQIV KRSARILNVG IEDEAAEEIA RRARGTPRVA NRILKRIRDF AQVKSDGFIT
KEIARTGLEA LEVDEIGLDA VDRNLLMSII EKFGGGPVGL DTLAATIGEE PDTIEDVYEP
YLLQLGFINK TPRGRMATKL AYEHFGLKYE
|
|---|
| |