Gene Cthe_0181 details

Gene Information

• Locus tag: Cthe_0181
• Symbol: ruvA
• ID: 4808669
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium thermocellum ATCC 27405
• Kingdom: Bacteria
• Replicon accession: NC_009012
• Strand: +
• Start bp: 217532
• End bp: 218140
• Gene Length: 609 bp
• Protein Length: 202 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 640105592
• Product: Holliday junction DNA helicase RuvA
• Protein accession: YP_001036615
• Protein GI: 125972705
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0632] Holliday junction resolvasome, DNA-binding subunit
• TIGRFAM ID: [TIGR00084] Holliday junction DNA helicase, RuvA subunit

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.595877
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGTTTGCAT ATATCAGAGG AAGACTTGAA TACAAAAACA ATGATTTTTT GATTGTTGAA 
TCAAACGGAG TGGGATACAG GATTTTTACG TCCCTTTCCA CCATTTCGGG CATTGGCGAG 
ATAGGACAGG AAGTAAAGGT CTACACATAT CTTTATGTTC GGGAAGACGT TATAAGCTTG 
TATGGATTTT TAACTCAGGA AGAGCTCAAT GTGTTTGAAC TCTTAATCAG TGTTTCCGGT 
GTGGGACCGA AGGCGGCGGT ATCGGTTTTG TCGGCAATAT CGCCCTCCAG GTTCAGCCTT 
GCGGTTATAA CCGATGATGT AAAGACATTG ACAAAAGCTC AGGGTATAGG AAAGAAAATT 
GCCCAAAGGA TAATACTTGA ACTTAAGGAC AAGATAAAGA AAGAACAGCT GACAGAATAT 
GCCCAAAGTG AAGAAGGCGG CAAAGTTTTG GACACGGACA GTTCAAAAAT GGCGGAGGCG 
GTAAGCGCCC TTATGGTTTT GGGATATTCT CCGGCTGAAG CAAATAAAGC GGTATCGGCG 
GTTTACAGGG AGGATATGGA CATCGAAACG ATAATTAAAA ATGCTCTTAA AGGACTGGCA 
AGACCTTAA 

 

Protein sequence

MFAYIRGRLE YKNNDFLIVE SNGVGYRIFT SLSTISGIGE IGQEVKVYTY LYVREDVISL 
YGFLTQEELN VFELLISVSG VGPKAAVSVL SAISPSRFSL AVITDDVKTL TKAQGIGKKI 
AQRIILELKD KIKKEQLTEY AQSEEGGKVL DTDSSKMAEA VSALMVLGYS PAEANKAVSA 
VYREDMDIET IIKNALKGLA RP