Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0119 |
Symbol | |
ID | 4808745 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 150848 |
End bp | 151297 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640105530 |
Product | anti-sigma F factor |
Protein accession | YP_001036553 |
Protein GI | 125972643 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) |
TIGRFAM ID | [TIGR01925] anti-sigma F factor |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCCAA TAAATGAGGT TAGACTGGAG TTTGTCAGCA AATCAAGTAA TGAATCATTT GCCAGAGTTG TGGCGGCGGC TTTTGTATCT CAAATAGATC CGAATTTGGA GGAACTTGCG GATGTGAAAA CGGCGGTTTC CGAAGCCGTG ACAAATGCAA TAATTCATGG ATACGAAAAC GAGCCTGGTT TTGTAAAAAT GACTTTAAAG CTCTATGAAG ATGCCGTGGA GATAAGCGTA ACCGACGAGG GCAAGGGCAT AGAAGATATA GAAAAGGCCC GGCAGCCTAT GTATACTTCC AGGCCTGACA TGGAAAGGTC AGGGATGGGA TTTACAGTCA TGGAGAGTTT CATGGACAGG GTTGACGTTG TGTCCGAGGT GGGCAAAGGC ACAACCGTAA CAATGTTCAA AACTTTTAAT TCTGTGAGGG GTAGAAAAAA TACCCCGTAA
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Protein sequence | MNPINEVRLE FVSKSSNESF ARVVAAAFVS QIDPNLEELA DVKTAVSEAV TNAIIHGYEN EPGFVKMTLK LYEDAVEISV TDEGKGIEDI EKARQPMYTS RPDMERSGMG FTVMESFMDR VDVVSEVGKG TTVTMFKTFN SVRGRKNTP
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