Gene Cthe_0105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0105 
Symbol 
ID4808729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand+ 
Start bp137206 
End bp137862 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content44% 
IMG OID640105514 
Productriboflavin synthase subunit alpha 
Protein accessionYP_001036539 
Protein GI125972629 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0307] Riboflavin synthase alpha chain 
TIGRFAM ID[TIGR00187] riboflavin synthase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTTACGG GAATTGTAGA GGAAATTGGA TTGGTAAAGG AAATAATTCC TGGAAACAAG 
TCGATAAAAC TCACAATAAA ATGTGAGAAA ATTATGGATG ATGTAAAAGT CGGGGACAGC 
ATAGCCGTAA ACGGAATCTG TCTTACGGTC ACGTCTCTTG ACAACGGTGC CTTTACGGCG 
GACGTTATGC CACAGACCAT GAGAAAGACC AATTTGGGAA ACCTCAGGAC AGGAGAAAAG 
GTAAACCTTG AAAGAGCGTT AAGGCCCGTT GACAGGATGG GAGGGCATAT TGTCAGCGGG 
CATATTGACG GTACCGGAGT GATATTGTCC AAAGAGGAGG AGGACAATGC CATCTGGCTT 
GAGATTTCCG CACCTTCGGA CATATTGAAA TATATTGTGG TAAGAGGTTC GGTTGCATTG 
GACGGTGTCA GCCTTACCGT TGCATACGTG GATGAGAAGA GCTTTAAAGT TTCTCTTATT 
CCCCATACCG CATCGGTTAC AATATTGGGT TCAAAAAAGC CCGGCGACAG AATAAATATT 
GAATGTGACA TGCTGGGAAA ATATGTTGAG AAGCTGATGT GTTTCGACCG GCAGGACAAA 
AAGGAGGAAA AAAAGTCTGT GACCTTGGAT TTTCTGAGAG AACACGGATT TGCATAA
 
Protein sequence
MFTGIVEEIG LVKEIIPGNK SIKLTIKCEK IMDDVKVGDS IAVNGICLTV TSLDNGAFTA 
DVMPQTMRKT NLGNLRTGEK VNLERALRPV DRMGGHIVSG HIDGTGVILS KEEEDNAIWL 
EISAPSDILK YIVVRGSVAL DGVSLTVAYV DEKSFKVSLI PHTASVTILG SKKPGDRINI 
ECDMLGKYVE KLMCFDRQDK KEEKKSVTLD FLREHGFA