Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0079 |
Symbol | |
ID | 4808774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 110150 |
End bp | 110665 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640105488 |
Product | hypothetical protein |
Protein accession | YP_001036513 |
Protein GI | 125972603 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00000596475 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAACG GCAAAAAAGC AGTTCTGCCG TATAACAGGG TTAAAGCGGT GGAGTATGCG CACAAATGGG CTTTTGGGCG AAATCCGAAA TATTTTAATT TTGACAAACT TGGCGGCGAT TGTACGAATT TTGCATCACA GGTTTTGTTT GCCGGAAGCA ATGTAATGAA TTACACTCCC GTATATGGCT GGTATTATAT AGATGCAAAC AGAAGGTCTC CTTCATGGAC GGGAGTAAAC TACTTGTACA ATTTTCTGGT AAACAACAAA GGCCCGGGAC CTTATGCAGA GGAAACAGAT GTCAAAGACA TACAGCCCGG AGATATAATC CAGCTGTCGT TCGGCGGAGC ACCTCATTTT GATCATTCGC CGGTTGTGGT GCAGGTGGGT TCCCCTGCAA GTCTTCGGAA CATACTTGTG GCAGCCCATA CGTACGACAG GGATTATTAT CCTCTTACAA ACTATAACTG GGTTAACATC AGATTTATAC ATATATTGGG TGTGAGGACA CAATAA
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Protein sequence | MDNGKKAVLP YNRVKAVEYA HKWAFGRNPK YFNFDKLGGD CTNFASQVLF AGSNVMNYTP VYGWYYIDAN RRSPSWTGVN YLYNFLVNNK GPGPYAEETD VKDIQPGDII QLSFGGAPHF DHSPVVVQVG SPASLRNILV AAHTYDRDYY PLTNYNWVNI RFIHILGVRT Q
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